Pairwise Alignments

Query, 1028 a.a., TonB-dependent outer membrane receptor from Caulobacter crescentus NA1000 Δfur

Subject, 936 a.a., TonB-dependent receptor, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  176 bits (447), Expect = 5e-48
 Identities = 199/723 (27%), Positives = 307/723 (42%), Gaps = 127/723 (17%)

Query: 167 VVGSHI-RGAKDSASPVIILDRESLSRAGRTSVADALSALPQAFGGLGAEDASSTGADPT 225
           V GS I R   ++ASPV+ ++R+ +   G  SV D L  +P A  G     A + G D +
Sbjct: 46  VTGSRIKRTDMEAASPVLSMNRDEIEATGMISVGDILQTIPAA--GSALNTAFNNGGDGS 103

Query: 226 GTNSNKATGVNLRGLGTDATLVLVNGRRLAGTGLRGDFADVSSIPMAAVERIEVLLDGAS 285
                  T ++LR LG+   LVLVNG+R   +   G   D+++IP + +ERI+VL DGAS
Sbjct: 104 -------TNMDLRNLGSQRLLVLVNGKRWISS--LGSTVDLNTIPTSTIERIDVLKDGAS 154

Query: 286 ALYGSDAVGGVVNIVLRERFEGVETRAMVGATTQ-GGASQWSFGQTVGKAWNGGNLVISY 344
           A+YGSDA+ GVVNI+ R+ FEGVE     G   +     Q++   TVG     G L+ + 
Sbjct: 155 AVYGSDAIAGVVNIITRKNFEGVEVSVYGGQNAKYDDGRQYTADFTVGSVSEKGGLLFNM 214

Query: 345 EHSARDRLRGRDRD-----YTGQAD---LRVLGGTDRRRFYGMPGTILRANPSGVLAPAF 396
            H  +  +   DRD     Y+  AD   +RV G    +        I + N SG+     
Sbjct: 215 AHVTQQPIWAGDRDISDTGYSSTADNTRIRVKGSQLNQANQDALAAIGKPNSSGIYDYMS 274

Query: 397 AIPTGQSGVGLTPESFQAGTINLENQLGAYDVLPRQRRDSVYVALTQEVSSAVSLSADLR 456
              TG + VG+     + G+         Y   P Q R+S YV    ++S  + + +D  
Sbjct: 275 KEGTG-ANVGMDQFRPRTGSDVYNFAPDNYLSTP-QNRNSFYVQGFYDISDNLRVVSDFM 332

Query: 457 ATRRRFTNRSVASSPTLTV--------------NRNNPYFVSPTGQASERIA-------- 494
            T R+ +        TL                N  NP+  +  G ++  +A        
Sbjct: 333 MTNRKSSQELAPMPLTLGASFGAAASRVDIGGNNIYNPFGETLYGDSARAVANGKPVGYV 392

Query: 495 -YSF---LNELGGQRVNGLAETLGLSFGGQARLPGAWRLDAYGAYGLEQGRSRTDNLVNT 550
            Y+    + E G ++ N    T     G +  +   W   A   YG       T  L+N 
Sbjct: 393 PYALQRRMVEAGSRQYNQNDTTYRAMVGLEGNINDNWSWTASYIYGQNNQDVLTTGLLNL 452

Query: 551 SYLSEALGTTAN--NAATAFNTATDGFFNPFIGQGSNPSAILDFIRGGYLTRKTRGET-A 607
           + +++ALG   N  N   A N         F G GS    ++D+I    ++R   G T  
Sbjct: 453 TRINQALGDNCNASNGCVALNL--------FGGPGSVTQDMVDYITFDSVSRS--GLTMK 502

Query: 608 SVNLKLDGELFTLPAGAVGLAIGGQVRREALKTSGVSLTSGF-SPTPVA--------RRD 658
                + G+LF LPAG VGLA G + R E          SGF +P P+         +RD
Sbjct: 503 DYTFNIAGDLFDLPAGPVGLAFGLERREE----------SGFDTPDPLTVTGESSGNQRD 552

Query: 659 VQR---RIGAVFAELRAPIFGGDFVRPGLQRLELSAAVRRED---YGDIASTDPKVGLIW 712
                 R+   +AEL  P+         ++ L ++ AVR  D   YG+  +T  KVG  +
Sbjct: 553 ATSGGFRLDEAYAELAIPV---------IESLLITPAVRVSDHDAYGN--NTTGKVGAEF 601

Query: 713 SPASGLTLKASYGASFRAPALIEL------NEPQIYAPTTLTRNGK-------------- 752
            P   + L+ ++   +RAP++ +L      + P    P   TR+ K              
Sbjct: 602 RPMDDMLLRGTWAQGYRAPSISDLYAGSADSYPTWNDPCN-TRDSKGNVLNISGLPGCAG 660

Query: 753 --------DTIVMILYGGNQDLRPETATSKTLTVALAPARWPRFKASVTGFDTRFSDRIG 804
                   +T + I    + DL+PET+ S T      P+     + +V  ++ +  D IG
Sbjct: 661 VPDGYRQANTQIRISQVSSPDLKPETSESYTFGTVYNPSWLEGAEFTVDYYNIKVEDAIG 720

Query: 805 QPG 807
           + G
Sbjct: 721 RYG 723