Pairwise Alignments

Query, 596 a.a., very-long-chain acyl-CoA synthetase from Caulobacter crescentus NA1000 Δfur

Subject, 518 a.a., putative crotonobetaine/carnitine-CoA ligase (RefSeq) from Shewanella loihica PV-4

 Score =  137 bits (344), Expect = 1e-36
 Identities = 135/499 (27%), Positives = 200/499 (40%), Gaps = 25/499 (5%)

Query: 57  KTITYADLDAMANRYAHWAKGLGLTRGQTVALFMPNRIEYLAIWYGLTKVGVATALINNQ 116
           +T TY  LDA  NR A+     G+ +G  VA+ + N  E++  W+GL K+G     IN Q
Sbjct: 36  RTFTYQSLDAQINRAANLFLKQGIAKGDKVAVQLYNSPEFIFCWFGLAKIGAVIVPINTQ 95

Query: 117 LTGAALAHCLTISQAMHCIVDAETSPCFEDVKGQLERHMQQWVLGPVHDDQRDLLKALKS 176
                 ++ LT       + +    P +E +  + +R  Q +V     +     +     
Sbjct: 96  YVQGECSYILTKCDVTALVTEPSFLPIYEALAAKGQRLEQVFVARAAGEQFAGRVNFDDQ 155

Query: 177 CSQLRPDRETAREGLTASDTALYIYTSGTTGLPKAARITHMRAQLYMRGFAGSTGAKDTD 236
            +   P  +     L + D A  ++TSGTT LPK   +TH   Q      A  T     D
Sbjct: 156 LALQAPTLDL-HVPLESEDPAEILFTSGTTSLPKGVVLTHCNLQFAGHYTAWQTRLTAKD 214

Query: 237 RIYITLPLYHATGGLCALGAALLNGGSVVLRKKFSATHFWPEIVAEQCTMFVYIGELCRY 296
           R    +P +H      A  A    G  +V+ +K+SA  FW +I   + T+   +  + R 
Sbjct: 215 RYLSMMPNFHIDFQCNAAMAVFTVGACLVMLEKYSARRFWKQICDYRATLTHSMPMILRT 274

Query: 297 LANQPEHELERAHKLR-MIFGNGLRADVWDDMLDRFKVGDVLEFYGATEGNVSFFNFDGK 355
           L  QP  E E  H LR M+F   +      D   RFKV  +   YG TE  V        
Sbjct: 275 LMLQPVAEGEDQHCLRDMLFFMHISDQEKLDFETRFKV-TLFNSYGMTETLV-------- 325

Query: 356 RGAIGRIPSYLRKKFNIRIVKFDVETETPIRGPDGCCIEAGPEEVGECIGHIGSDARSNF 415
            G IG  P   R   +I       E +      D    E  P  VG+ +   G   RS F
Sbjct: 326 -GLIGDTPGEPRHWPSIGRPGLGYEAKV----IDETGREVPPNVVGD-LWVKGVPGRSLF 379

Query: 416 TG-YADKAATEKKVLHDVFEKGDAWFRTGDLMKVDHDGYIYFIDRIGDTFRWKGENVATS 474
              Y D  ATE  +      + D W  TGD   VD  G  YF+DR  +  +  GEN++++
Sbjct: 380 KEYYQDPQATEAVL------RRDGWLITGDKAYVDERGLFYFVDRKSNMIKRSGENISST 433

Query: 475 EVAERLAGFEGVLEVNVYGVKVGDLDGKAGMASLVTEG-DFDLEAFAKYVDEALPSYARP 533
           EV   L     + +  V GV     D       +   G    +E    +    +  +  P
Sbjct: 434 EVENVLMSHPAIQDAAVIGVADPIRDQAVKAFVIFAPGMSLTVEEILAFCSANMAKFKVP 493

Query: 534 LFVRLQKAIETTGTFKYRK 552
            +V +++A   T T K  K
Sbjct: 494 SYVEIREAFPRTCTCKVDK 512