Pairwise Alignments

Query, 505 a.a., exodeoxyribonuclease VII large subunit from Caulobacter crescentus NA1000 Δfur

Subject, 442 a.a., exodeoxyribonuclease VII large subunit (RefSeq) from Shewanella loihica PV-4

 Score =  251 bits (641), Expect = 4e-71
 Identities = 173/467 (37%), Positives = 250/467 (53%), Gaps = 41/467 (8%)

Query: 14  YSVSELAFALKRTLEDRYGFVRLRGELSKVTHHSNGHVYLTIKDDKSAIDGVVWKGNVRG 73
           Y+VS L   +++ LE   G V L  E+S  +  S+GH YLT+KD+ + I   ++KG  R 
Sbjct: 9   YTVSRLNGEVRQLLEGELGKVWLEAEISNFSAPSSGHWYLTLKDNYAQIRAAMFKGRNRA 68

Query: 74  LGVRPEHGLEVIVTGKITTYPAGSRYQIVIDSMEAAGVGALLAQLERLKAKLAAEGLFAP 133
           +  RP +G +V+V G I+ Y     YQ++IDSM  AG G L  Q E LK KLAAEGLFA 
Sbjct: 69  VTFRPANGQQVLVKGAISVYEPRGDYQLIIDSMLPAGDGLLAQQYEALKMKLAAEGLFAA 128

Query: 134 ERKRPLPSMPAVVGVITSPTGAVIRDILHRIRDRWP-CQVLVWPCVVQGDAAAGQVSAAI 192
           + KRPLPS    +GV+TS TGA IRD+LH ++ R P  +V+++P  VQG+ A   +    
Sbjct: 129 DTKRPLPSNIQRIGVVTSATGAAIRDVLHVLKRRDPSIEVIIYPSQVQGEHADKSLC--- 185

Query: 193 RGFNAIQPGGPVPRPDVLIVARGGGSVEDLWAFNDEGLARTVAEGTIPLISAVGHETDTT 252
              +AI         DVL++ RGGGS+EDLW FN E LA T+    +P++SAVGHE DTT
Sbjct: 186 ---HAIMQANDRMEVDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPVVSAVGHEVDTT 242

Query: 253 LIDFVSDRRAPTPTAAAEM----ATPVLAELRALISDLDRRLNRCGARTIEERRTRLVSA 308
           + D+V+D RAPTP+AAAE+    A     +LR  ++ L +     G +  +    R    
Sbjct: 243 ISDYVADLRAPTPSAAAELLSQDALSKADKLRMTMTRLKQGWQHYGLKQAQ----RFSQL 298

Query: 309 ARGLPR--PNDLLALAQQRFDIASGRLDAALDRNTTVHAQSLLKVTARLTPEALGRQRAV 366
              L R  P   L   +QRFD    RL AAL        +    + ARL   +   Q A+
Sbjct: 299 HHRLERQDPKRRLQQYEQRFDELQLRLGAALTGKLHQMERRQQSLHARLNQVSPSHQLAL 358

Query: 367 KAERLADLSRRLDLAARRAPDRVAQHARLPALWDRLNAAGQRRLQRDADRLENLEKLRQS 426
            A RL   ++RL             H+ + A   RLN+A ++ LQ  A +LE       +
Sbjct: 359 AASRLTHQNQRL-------------HSAMQA---RLNSA-EKSLQYAAHQLE-------T 394

Query: 427 LNPERPLELGFALVRKGDGTLARSAADLVSGERVNLKFKSGDRDAVI 473
           ++P   L  G+++    +G +  SA D+ +G R+  K   G+  + +
Sbjct: 395 VSPLATLSRGYSITLDTEGKVLHSAQDVRTGARLTTKLVDGEVQSTV 441