Pairwise Alignments

Query, 568 a.a., DNA repair protein recN from Caulobacter crescentus NA1000 Δfur

Subject, 553 a.a., recombination and repair protein (RefSeq) from Shewanella loihica PV-4

 Score =  268 bits (685), Expect = 4e-76
 Identities = 183/573 (31%), Positives = 282/573 (49%), Gaps = 31/573 (5%)

Query: 1   MLIGLSIRDVVLIESLDLAIGEGLTALTGETGAGKSIILDALGLATGARADAGLVRRGAT 60
           ML  LSI +  ++  L+L    G+T++TGETGAGKSI +DALGL  G RADA  VR GA+
Sbjct: 1   MLCQLSINNFAIVRFLELDFKSGMTSITGETGAGKSIAIDALGLCLGNRADANTVRPGAS 60

Query: 61  GHASATAIFALPADHPAFAYLDDKGLSYARDEDVVLRRQLSPDGRSRAFVNDQATSVGVL 120
             A  +A FAL     A  +L+D  L    D++ +LRR +  DGRSRA++N     +  +
Sbjct: 61  -KAEVSARFALNDIPLAKRWLEDNDLEL--DDECILRRTIGSDGRSRAYINGNPVPLNQM 117

Query: 121 KDLGALLLEVHGQHETVGLLDPKTHRGLLDTFGG--VSLGAVASAWSAWRAARDRAEALR 178
           + LG  L+ +HGQH    +L  +    LLD++    + L A ++++  ++  +     L+
Sbjct: 118 RALGQQLIGIHGQHAHHAMLKSEHQLTLLDSYANHKMLLEACSASYQRFKLIQKELSQLQ 177

Query: 179 DLAGRAAAETEELTLRLSELDRL-------DPREGEEASLAEERALLSSAEKAMADIAAA 231
                  A  + L  ++ ELD         D  E E   LA   AL+ + ++ +      
Sbjct: 178 QSQHERIARKQLLQYQVEELDEFALGEEEFDEIEAEHKKLANGTALIQACQRTLY----- 232

Query: 232 QDALAGDNLSGRLAQAYRALERARDRALQAGAPAEGSAMTRLSAACEAVDRALVEAQEAS 291
              L  DN  G       A+E   + +L      EG     L      ++ AL++ QE+S
Sbjct: 233 ---LLQDNEEG-------AIESLLNMSLDQAQELEGYD-PELKGVGNMLNDALIQVQESS 281

Query: 292 AAIDAVAETFEFEPDRLEKAEERLFALRGMARKLNVLVDDLPAKRAEFAARLQAIETSED 351
           + +    +  E +P+     E+RL  +  +ARK +V   DL       +  L  +++ E+
Sbjct: 282 SELQRYLDKLELDPEHFAALEQRLSKIMMLARKHHVNAKDLYQHHQALSQELSELDSDEE 341

Query: 352 SLRAAEKDAAEAREAYLYAAEALSAERRAAGDALAKAVEAELTPLKLEKARFRVAVEPLG 411
            L    +     RE+++  A+ LS  R+     L K V   +  L + K +F + V+   
Sbjct: 342 KLDEIAQQLESCRESFIAHAQKLSQSRQRYAKELDKQVTRSIHELSMPKGKFIIDVQ-FN 400

Query: 412 EDRAGPSGLDRVAFEISTNPGAPFGAMEAIASGGELARFALALKAALAGRGGGPQPLMIF 471
            +   P+G D V F+++TNPG P   +  +ASGGEL+R  L ++   A +     P +IF
Sbjct: 401 PEMMSPNGCDTVEFQVTTNPGQPLQPIAKVASGGELSRIGLGIQVITAKKVA--TPTLIF 458

Query: 472 DEVDQGVGGAVADAVGLRLKRLAANAQVLVVTHSAQVAARGDAHWRISKSGDDTSTRTRV 531
           DEVD G+ G  A  VG  L+ L  + QVL VTH  QVA  G  H  ++K      T T +
Sbjct: 459 DEVDVGISGPTAAVVGKMLRALGESTQVLCVTHLPQVAGNGHQHMFVNKQSKAGQTETSM 518

Query: 532 EPLSPAQREEEIARMLSGAEVTEAARAAARALL 564
            PL   QR EE+AR+L G  +T    A A+ LL
Sbjct: 519 VPLDKGQRIEELARLLGGDVITNNTLANAKELL 551