Pairwise Alignments

Query, 966 a.a., TonB-dependent receptor from Caulobacter crescentus NA1000 Δfur

Subject, 720 a.a., TonB-dependent receptor (NCBI) from Rhodospirillum rubrum S1H

 Score = 97.4 bits (241), Expect = 3e-24
 Identities = 104/378 (27%), Positives = 156/378 (41%), Gaps = 43/378 (11%)

Query: 58  VISQTLRRAALLAGASTLSLVLALPAAAQTAPAPQDGVTIDEL--------------VVT 103
           V+S+  RR AL A    LSL +A    A  A A     T  E+               VT
Sbjct: 23  VVSEMNRRRALPA---VLSLAVAQMVGATVAVADDRKETAQEVQVAGSGEVYQLQPVTVT 79

Query: 104 AQRREEKLQDVPIAVSAFSNDMLSRQKIDGGPNLQLAIPNVTFAKS--FYSGYNFQIRGI 161
           A++     QD P++++  + + L R       ++   +PN+   K+    S     +RG+
Sbjct: 80  AEKMTSTDQDTPVSMTVVTGEDLERSAAKDTIDIVRQVPNMYMTKAGQHASVAFLSMRGV 139

Query: 162 GTKQTAV--TGDSSTGVHFNGAPLTSNRLFEAEFFDVERVEVLRGPQGTLYGRNATGGVV 219
                A    G    GVH+        R  + E  D++RVEVLRGPQ TLYGRN   G V
Sbjct: 140 TPFMEAEQPVGFFVDGVHY--------RNVDMELLDIDRVEVLRGPQSTLYGRNTEAGAV 191

Query: 220 NVLSAKPTGEFEGMVRAEVSNYDGRKLRGMVNIPLVADKLDLRLAGATLNRGGFVDNLGT 279
            +++  P    EG V   + NY+ + + G+   PL ++    R A   L+  G+      
Sbjct: 192 TIITRDPEPHQEGQVSVGIGNYNRKTISGITGGPLGSEDWSYRAAVQFLDSDGYFTREPD 251

Query: 280 G-DKVDDRDLYSFRASLRWRPTSTID--ANFVWQHFKERDSRLRTGKGLCTRDNGPSS-- 334
           G D VDD    + R  +RW+P    D  A +    ++E  + +     L    +  SS  
Sbjct: 252 GADDVDDATNVNARFKVRWQPQQAWDVIATYDGARYREGSTNIAPLSALREDSHKVSSNY 311

Query: 335 VGG--TAITNATVRGFLSAGCADASVYNAAAYGTPNSLATLYGIIGFARGL----TSGDV 388
           +G   + +    VR    A     +V + +AYG  N   T Y + G A  L    T  D 
Sbjct: 312 IGSNDSDVHGGNVRAVYEAPA--VTVTSISAYGYENK-DTTYDVDGSALDLMRLRTGVDY 368

Query: 389 YGGTQPKGLDVIDSAKNP 406
              TQ   L   + A  P
Sbjct: 369 SRFTQELRLSSPEGASGP 386



 Score = 77.4 bits (189), Expect = 3e-18
 Identities = 58/209 (27%), Positives = 88/209 (42%), Gaps = 12/209 (5%)

Query: 551 DPNRVPTGQGHGNYLSFQPYHLDSNALFGEVYYEATPELKFTVGLRYTDDKKTLDNFPVK 610
           D +   TG G G           + A FG+V +     L    GLRY  ++K +++   +
Sbjct: 402 DIDMTMTGMGMGVQSVRTTTDTRNMAAFGQVTWPLIDSLSLITGLRYDHERKDVES---Q 458

Query: 611 LLTPGSGLTPGTPPQLTAEFKKFTGRAGFDWKPDLGFTDDTLVYAFYSRGYKGGGPNNIG 670
                 G   G    +T  F  +  + G ++KP        L YA YS GYK GG NN+ 
Sbjct: 459 QTWAAMGRDTGVDQDMT--FHAWLPKVGLEYKP----FPTLLTYATYSGGYKAGGFNNLA 512

Query: 671 QVATLRPFYEPEYVNAFEVGTKNTLLGGALVLNGSAFFYDYKGYQISKFVNRISVTENID 730
                +  Y+ EY   +E+G K+T L   L    S F+ D+   Q+ + +   S   N  
Sbjct: 513 DPGNEK--YDAEYTRNYEIGVKHTALDNTLSTKLSLFWIDWTDQQVEELILSQSNISNAG 570

Query: 731 AEI-KGVELEAVWEPVKRFRMNGTVGLLD 758
             + +GVELE  W+  K   +    G  D
Sbjct: 571 QSVSRGVELELAWKATKALLLKAGAGWND 599



 Score = 33.1 bits (74), Expect = 7e-05
 Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 11/114 (9%)

Query: 849 GNELPGSPNWTASIGAQYSFDVLDGWEGTVRGDYYRQGDSYARVFNTSVDQLKGWANANL 908
           G   P +P +T S+GA YSF+  +G       D+   G+ Y    NT  ++  G  N   
Sbjct: 614 GKRPPNAPAYTYSLGADYSFE--NGL--YAHADWLGTGEVYFNSANTQKERPYGLLNLKT 669

Query: 909 SFRLVNDERGLEIEGYVKNVFNKRAITDVFLMDEALGQVANAVFTEPRIIGVSL 962
            ++        E+  +VKN  +    T  F   +  G     +  +PR  G+++
Sbjct: 670 GYQ----GESYEVALWVKNALDADYATRAF---DLGGGTYGGIAGDPRTFGMTV 716