Pairwise Alignments

Query, 966 a.a., TonB-dependent receptor from Caulobacter crescentus NA1000 Δfur

Subject, 857 a.a., TonB-dependent receptor (RefSeq) from Shewanella loihica PV-4

 Score =  169 bits (429), Expect = 6e-46
 Identities = 211/768 (27%), Positives = 310/768 (40%), Gaps = 126/768 (16%)

Query: 56  RMVISQTLRRAALLAGA---STLSLVLALPAAAQTAPAPQDGVTIDELVVTAQRREEKLQ 112
           R  +S++  + + LA A   +    V A  A A      Q     + + VTAQ+R +++Q
Sbjct: 15  RAAVSRSNMKLSCLAMAVFGAISGQVFAEEAQAPEEAKEQKASAFEVIEVTAQKRVQRMQ 74

Query: 113 DVPIAVSAFSNDMLSRQKIDGGPNLQLAIPNVTFAKSFYSGYN-FQIRGIGTKQTAVTGD 171
           DV IA+SAF  D L          L   IPN+  A S  SG   F IRG+G +       
Sbjct: 75  DVGIAISAFKADELEDLGAYQASALAEFIPNMEVAVSDDSGIPIFVIRGVGLQDYNTNNT 134

Query: 172 SSTGVHFNGAPLTSNRLFEAEFFDVERVEVLRGPQGTLYGRNATGGVVNVLSAKPTGEF- 230
            +T V  +              FD +RVEVL+GPQG LYGRN+TGG ++  S +P  E  
Sbjct: 135 PNTAVVVDDVYQPYGIYSAFAMFDTDRVEVLKGPQGGLYGRNSTGGAISFSSKRPELETT 194

Query: 231 EGMVRAEVSNYDGRKLRGMVNIPLVADKLDLRLAGATLNRGGFVDNLGTGDKVDDRDLYS 290
           E  V  +  NY+   +R   ++PL  +   +RLA  +    G+  N         +D   
Sbjct: 195 EANVAVDYGNYNSLNIRAGASLPL-GEVAAVRLAVQSETSDGYYYNTYLNRDQGGKDKQQ 253

Query: 291 FRASLRWRPTSTIDANFVWQHFKERDSRLRTGKGLCTRDNGPSSVGGTAITNATVRGFLS 350
            R +L + P     A+            LR   G  T +     V G   +NA   G L+
Sbjct: 254 ARFTLHYEPADYFAAD------------LRYTYGRDTSEASIPEVTGLLDSNAYWEGPLA 301

Query: 351 A--GCADASV-YNAAAYGTPNSLATLY-------GIIGFARGLTSGDVYGGTQPKGLDVI 400
              G    ++ YN    GTP     +          I   R    GD Y G   +    +
Sbjct: 302 GFPGLPSMNIPYNQD--GTPAYCDAVLQTGIPDASCINMNRASADGDPYSGADAR----V 355

Query: 401 DSAKNPYYRAEEDVFTLNVAWDINDKLQLNSLTSYYDGELDARQEMNRFQASTVFNSTTL 460
               + Y+       +LN+ WD +D   L S+T+Y   +   R  +          S  L
Sbjct: 356 HPNDDTYHSV-----SLNMNWDFSD-YSLISITNYTQMQFKHRNGVG---------SVGL 400

Query: 461 APG-------------GLVNDPQLGASNRMSVSDRITTPSRQWSQELRLQSSFDGPFNFS 507
            PG             G +N   L   N M V+ +  + +  WSQELRL S++ G FN+ 
Sbjct: 401 GPGQDQEAWEQASRDYGRLNGGDL---NEMYVT-QYDSDTSSWSQELRLLSNYGGDFNWM 456

Query: 508 LGGLALRYDVVQSFYIMSNAFTYAAMVANGGANCAPGGSCVYIDPNRVPTGQGHGNYLSF 567
           +G                    YA    +   NC+   + VY D  + P   G G     
Sbjct: 457 VG------------------LVYAEDNLDDLRNCSFAAN-VYADWKQFP---GCGTMAYT 494

Query: 568 QPYHLDSNALFGEVYYEATPELKFTVGLRYTDDKKTL--DNF--PVKLLTPGSGLTPGTP 623
           Q   + S   + ++ Y  +  L  TV LRYT +KK    D F      +   +GL    P
Sbjct: 495 QDTEVISG--YAQLTYAISDTLSTTVDLRYTQEKKDYVGDVFVNDGTWICTANGLNTTDP 552

Query: 624 --PQLTAEF---KKFTGRAGF-------------DWKPDLGF--TDDTLVYAFYSRGYKG 663
             P   A F      TGR                 WK +L +  T DTL+YA     +K 
Sbjct: 553 DSPTYCANFIGWDPVTGRYDLARGNKSHYDESDPSWKVNLDWKVTPDTLLYASVGSSFKS 612

Query: 664 GG--PNNIGQVATLRPFYEPEYVNAFEVGTKNTLLGGALVLNGSAFFYDYKGYQISKFVN 721
           GG     +     +RP Y+PE  N  E+G K+TL    + +NG+AF+YDY+ +Q S    
Sbjct: 613 GGFFGGFLTNPNAIRP-YKPERNNGVELGFKSTLEDYRVQINGAAFYYDYRDFQ-SAIQE 670

Query: 722 RISVTENI--------DAEIKGVELEAVWEPVKRFRMNGTVGLLDTKI 761
               T  +        D  ++G EL+  W   + F +   +GLLDT++
Sbjct: 671 VDQSTGGVFNGLRNLGDVIMQGAELDLRWMATEDFEIRAAIGLLDTEV 718



 Score = 42.4 bits (98), Expect = 1e-07
 Identities = 29/133 (21%), Positives = 60/133 (45%), Gaps = 7/133 (5%)

Query: 836 GVTPTDGVAAKLKGNELPGSPNWTASIGAQYSFDVLDGWEGTVRGDYYRQGDSYARVFNT 895
           G+T   G    ++GNEL  +P ++ ++ A+Y + +    EG ++ D   + D +  V N 
Sbjct: 730 GITNIFGEVIDIQGNELNNAPKFSGNLIARYHYQLSAELEGFIQLDASFKDDYWLSVSNE 789

Query: 896 SVDQLKGWANANLSFRLVNDERGLEIEGYVKNVFNKRAITDVFL--MDEALGQVANAVFT 953
            + + KG+   N+   + +      +  + +N+ +K      +L  +D    +     + 
Sbjct: 790 PIYREKGYTLVNMRAEIFSPADNWSVAVWGRNLTDKTYRNSFYLDGLDSGYSE-----YN 844

Query: 954 EPRIIGVSLQKTF 966
            PR  GVSL   +
Sbjct: 845 APRTFGVSLSYNY 857