Pairwise Alignments

Query, 353 a.a., quinol cytochrome oxidase polypeptide II from Caulobacter crescentus NA1000 Δfur

Subject, 386 a.a., cytochrome o ubiquinol oxidase subunit II from Sinorhizobium meliloti 1021

 Score =  430 bits (1105), Expect = e-125
 Identities = 209/340 (61%), Positives = 254/340 (74%), Gaps = 7/340 (2%)

Query: 15  KSLLLAPAVLALGGCDWVVMNPSGDIAAQQRDLIILATVLMLLIIVPVIALTLFFAWKYR 74
           + L + P  L + GCD VVM+PSGDIAAQQRDLI+++T+LMLLIIVPV+ LTLFFAW+YR
Sbjct: 9   RRLAVLPLFLVMAGCDMVVMSPSGDIAAQQRDLIVISTILMLLIIVPVVFLTLFFAWRYR 68

Query: 75  ASNEEATYAPDWHHSTRLEIIIWAAPLIIITILGAVTWSSTHLLDPYRPLDRIAPGRSAE 134
            SN  ATY P+WHHST LE++IW+APL II  LGA+TW STH LDPYRPLDR+   R+  
Sbjct: 69  RSNTSATYDPEWHHSTALEVVIWSAPLAIIIALGAITWISTHKLDPYRPLDRLDAERAIP 128

Query: 135 -NIKPLKVQVVALDWKWLFIYPELGIATVNEMAAPVDRPLNFELTSSSVMNSFYVPALAG 193
            + +PL V+VVALDWKWLF YP+LG+A VNE+AAPVD P++F++T+SSVMNSFY+PALAG
Sbjct: 129 ADARPLTVEVVALDWKWLFFYPDLGVAAVNELAAPVDVPIHFKITASSVMNSFYIPALAG 188

Query: 194 QIYAMPGMKTKLHAVINKPGQFEGFSANYSGDGFSHMRFKFHGMSEADFKRWVDGVRAGS 253
           QIYAMPGM+TKLHAVINKPG++EGFSANYSGDGFSHMRFKFHG+    F  WV  V+A  
Sbjct: 189 QIYAMPGMETKLHAVINKPGEYEGFSANYSGDGFSHMRFKFHGLDRQGFDDWVARVKAQG 248

Query: 254 GRLDRSRYLDLERPSEKQPVLRFASVDSGLFGAAVDRCVEPGKMCHHDMAAIDARGGLGM 313
             L+R  YL LE+PSE++PV  +A+V+ GL+ A ++ CV PGKMC  +M  ID  GG G 
Sbjct: 249 TALNRDAYLKLEKPSEREPVRYYAAVEDGLYRAILNLCVTPGKMCMEEMMHIDMMGGAGK 308

Query: 314 AGVYNVTTLEYDKRTRRGEGGGFRSFVAALCAPITGASAR 353
               N   LEYD R    EG        A   P TG  AR
Sbjct: 309 ESAENREKLEYDNRHSLAEG------APAATHPATGTPAR 342