Pairwise Alignments

Query, 353 a.a., quinol cytochrome oxidase polypeptide II from Caulobacter crescentus NA1000 Δfur

Subject, 327 a.a., cytochrome c oxidase subunit II from Sinorhizobium meliloti 1021

 Score = 79.0 bits (193), Expect = 2e-19
 Identities = 69/239 (28%), Positives = 105/239 (43%), Gaps = 32/239 (13%)

Query: 20  APAVLALGGCDWV--VMNPSGDIAAQQRDL---IILATVLMLLIIVPVIALTLFFA--WK 72
           A + LAL GC  +   ++PSG  A +   L   ++L +  +L+ +  + A+ LF    W+
Sbjct: 9   AASALALQGCAGLQSALDPSGAEAERIGTLSWLLVLFSTAILVAVCLITAVALFGGERWR 68

Query: 73  YRASNEEATYAPDWHHSTRLEIIIWAAPLIIITILGAVTWSSTHLLDPYRPLDRIAPGRS 132
            R + E               I+I    +  I  L  +     +L+ P            
Sbjct: 69  ARIAGER--------------IVIGGGLVFPILALSVLLIYGFYLMSPGTT--------E 106

Query: 133 AENIKPLKVQVVALDWKWLFIY-PELG--IATVNEMAAPVDRPLNFELTSSSVMNSFYVP 189
           A +   L+++VV   W W   Y  E G  I + NE+  PV RP+  ELTS+ V++SF+VP
Sbjct: 107 ARSQGALRIEVVGERWWWRVTYVDEAGRRIESANEIRLPVGRPVELELTSADVIHSFWVP 166

Query: 190 ALAGQIYAMPGMKTKLHAVINKPGQFEGFSANYSGDGFSHMRFKFHGMSEADFKRWVDG 248
            LAG++  +PG    L     K G   G  A Y G   + M F    M E  F  W+ G
Sbjct: 167 RLAGKLDMIPGHTNTLTLQATKAGISRGQCAEYCGGPHAFMSFYVIAMPEDQFSSWLAG 225