Pairwise Alignments

Query, 347 a.a., potassium channel protein from Caulobacter crescentus NA1000 Δfur

Subject, 346 a.a., TrkA-N domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  166 bits (419), Expect = 1e-45
 Identities = 105/320 (32%), Positives = 164/320 (51%), Gaps = 9/320 (2%)

Query: 19  LAFAVAFVLAVAGMAVLAYMRA-GWSFGDALYMVTLTIFTVGYGEVRPVDTDDLRAVTMA 77
           L  +   +L V   A  AY    GWS  D+ YMV +T+ TVG+ EV P+     R +T  
Sbjct: 23  LVISQCTMLVVFATATWAYSHIEGWSLWDSFYMVVITLSTVGFQEVHPLSNAG-RVLTTV 81

Query: 78  TMVFGCTGVIIVTGALVQALTQSQLEQFFGKR-VERDIEKLDGHIVICGFGRIGLMLASE 136
            ++ G      + GA  Q L   +L +  G+R V + I  L GH VICG+GRIG ++A E
Sbjct: 82  LILTGVGNFAFILGAFSQLLVDGKLYKVLGRRRVLKTISSLRGHCVICGYGRIGSVVARE 141

Query: 137 LAAAGERFVVVERDEARCDEARELGYLCRHADATDEDVLRAMHVERAKVLATVLPDDAAN 196
           L   G   VVVE D    +     G +    DAT +DVL A ++  A+ L   L  D+AN
Sbjct: 142 LMQEGVPIVVVENDPVAVERLENDGIVHLAGDATSDDVLNACNIAHARALIAALSLDSAN 201

Query: 197 VFITLSARSLNPKIEIIARGERPTTERKLIQAGADKVVMPAHIGAERIAEMILYPRLAGF 256
           V++ LSAR LNP + IIAR    +   KL  AGAD+V +P H+G  R+A+ IL P +  F
Sbjct: 202 VYVVLSARQLNPDMAIIARAGDASHIGKLQLAGADRVFLPHHLGGLRMAQSILRPTVTTF 261

Query: 257 LKEARAPAAQQSEALAQLGLDLGLVTAPASFAARRVTVGEFERRGGVLVVRIERANGALI 316
           ++ A       S+    + ++   V   +  A + +      +R  ++V+ +++ +G ++
Sbjct: 262 MELA------HSKTDMNIQMEELTVGDASELAGKTLMASGIRQRFNLIVIGVKKPDGRML 315

Query: 317 EKPKADEVIGAGDGLAVLSK 336
             P++   +  GD L  + +
Sbjct: 316 FNPESTYELNPGDTLVTVGR 335