Pairwise Alignments

Query, 520 a.a., penicillin-binding protein from Caulobacter crescentus NA1000 Δfur

Subject, 380 a.a., beta-lactamase (RefSeq) from Shewanella loihica PV-4

 Score = 84.0 bits (206), Expect = 9e-21
 Identities = 75/337 (22%), Positives = 141/337 (41%), Gaps = 47/337 (13%)

Query: 52  VPGLSLAVVQGREVVMAAGYGVADLGTGRPAHADTAFYIASSTKAFTALAIAAIAARGTF 111
           VPG +  +VQG  +V    YG    G  +  +ADT F +AS +K F     + +      
Sbjct: 48  VPGGAFVIVQGDNIVTLDTYGKRHQGGSKKINADTVFRLASVSKTFAGALASQLVHEHKL 107

Query: 112 ALDAPLSRWIGDSPF--PADLAASVSLSDLLCHRSGLENQPIAHRAAFTGEHTPAAMSAL 169
           +   P+++++ +     PAD  A ++L  ++   +GL                P +   L
Sbjct: 108 SWQQPINQYLPNFSLAKPADSQA-ITLGHVIGQSTGL---------------MPNSYDNL 151

Query: 170 LRSTIRSKDT-----------PHGV-FRYTNTGYNLATTLIEDRFGLDWRDMVDREVLRP 217
           + + ++               P GV + Y N  ++     IE   G  + +++D+ +  P
Sbjct: 152 VNANVKLNKIIPKFAELTPICPPGVCYSYQNVAFSFIEQAIEQESGQPYEELIDKRIFVP 211

Query: 218 AGMTRTTARIDAARRRKGVALGHTPAADG----RIAPSPLQKTDATMQPAGGLVSTAREM 273
             M   +   +A       A  H     G    ++ P+  Q     + PA G+ ++ ++M
Sbjct: 212 LAMETASIGYEAFTHTSNRAEPHIKTKHGFKQVKVKPNYYQ-----LAPAAGVNASIKDM 266

Query: 274 ARWLEIQLNDGVLEGRRLFPEGLVAST----HRPRVPQQAKFGPYVRDG-YGLGWQTGRY 328
           A+WL   +     E + L P+ L   T       +  ++  + PY+ D  YG GW+  ++
Sbjct: 267 AKWLMANMGH---EPKVLSPQVLEDITTPGVRTTKELRRRDWKPYLDDAHYGKGWRIYQF 323

Query: 329 GEQPLIHHFGNFAGARAHVSLMPARGVGVAVMANEDA 365
               LI+H G  AG    V+  P   +G+A++ N ++
Sbjct: 324 NGHRLIYHAGWVAGYVTEVAYSPELDIGIAILLNGES 360