Pairwise Alignments

Query, 698 a.a., ATP-dependent DNA helicase recG from Caulobacter crescentus NA1000 Δfur

Subject, 691 a.a., ATP-dependent DNA helicase RecG (RefSeq) from Shewanella loihica PV-4

 Score =  452 bits (1162), Expect = e-131
 Identities = 293/660 (44%), Positives = 389/660 (58%), Gaps = 28/660 (4%)

Query: 12  SVSTLKGVGPRVAPLVEKLAGPIVRDVLFTAPSGLIRRTTTTVDQAVENQVQTFIVTIDG 71
           +V+ LKGV  ++A  +EKL    V+D+LF  P   +R    T    +         TI+G
Sbjct: 8   AVTELKGVAAKMAQRLEKLGINTVQDLLFHLP---LRYEDRTQIYPIAALYPGSYGTIEG 64

Query: 72  HQPPHRLGQPWK----IRAWDGTGFLTLVWFKGHGPHLERQHPKGARRAVSGKVERPEVF 127
                ++ Q  K        D +G +TL +F      +     +G R    G+V R ++ 
Sbjct: 65  IIQSTQIVQGRKRMLTCTVRDDSGTITLRFFN-FSAAMRNGLEEGERIRAYGEVRRGKLH 123

Query: 128 ASELQIAHPDYIVAEDKAGDIPLVET---VYPATHGLPSRTFRKLALEALARAPDLAEWQ 184
               +I HP+Y +   ++ D  L +T   +YP T GL   ++ +L  +ALA     A  +
Sbjct: 124 R---EIIHPEYKMLNGES-DFSLSDTLTPIYPTTEGLKQASWIRLTDQALALLAHGALTE 179

Query: 185 DAAWIEREKLPSWRDALAALHAPASEADLSPLSR----PRRRLAYDELLAHQLALAQRKA 240
                 R    S  DAL  LH P SE     L +     ++RL  +ELLAH L++ Q +A
Sbjct: 180 LLPPQLRPNQLSLVDALQLLHRPPSEVSPFALEQGTHPAQQRLIQEELLAHNLSMLQLRA 239

Query: 241 ARRSHPGPRI---PAGPLSEAAEKALPFKLTRAQIRALSEIRGDLASGERMSRLLQGDVG 297
             RS+    I   P G L      +LPFK T AQ R +++I  DL     M RL+QGDVG
Sbjct: 240 --RSNHDKAIAMQPTGQLLNPFLASLPFKPTGAQQRVVADITQDLDKAHPMMRLVQGDVG 297

Query: 298 SGKTVVAMLAMADAASAGFQSALMAPTEILARQHFETIAAPLEALDLSVILLTGRDKGAG 357
           SGKT+VA LA   A  +G+Q A+MAPTE+LA QH    AA  E L L+V  L G+ KG  
Sbjct: 298 SGKTLVAALAALQAIESGYQVAMMAPTELLAEQHANNFAAWFEHLGLTVGWLAGKLKGKA 357

Query: 358 RAAKLAGLAEGAHHIAVGTHALFQDDVGFRALALTIIDEQHRFGVNERRRLQEKGPANVD 417
           RA  L  +  G  HI +GTHA+FQ+ V F  LAL IIDEQHRFGV++R  L+EKG     
Sbjct: 358 RAQSLQQIKSGEAHIVIGTHAIFQEQVEFNRLALIIIDEQHRFGVHQRLGLREKG-IRQG 416

Query: 418 WGVHLLAMSATPIPRTLELTVFGDLDVSRIDEKPPGRTPVATRAVPTPRVPEIIERLR-V 476
           +  H L M+ATPIPRTL +T + DLD S IDE PPGRTPV T A+   R  E+I+R+R  
Sbjct: 417 FHPHQLIMTATPIPRTLAMTAYADLDTSIIDELPPGRTPVTTVAISDNRRGEVIDRVRQA 476

Query: 477 AISGGAQAFWICPLVSESDKVYLRAAEDRAADLARHLP--GVGLVHGQMPPAEKDAVMQR 534
           A+  G QA+W+C L+ ES+ +  +AAED A +L + LP   +GLVHG+M PAEK A+M  
Sbjct: 477 ALQDGRQAYWVCTLIEESEVLECQAAEDTAEELKQLLPELAIGLVHGRMKPAEKQAIMDA 536

Query: 535 FVDGEVNVLVATTVVEVGVNVPNASIMVIEHADRFGLAQLHQLRGRVGRGTRESACVLLY 594
           F  G + +LVATTV+EVGV+VPNAS+M+IE+ +R GLAQLHQLRGRVGRG   S CVLLY
Sbjct: 537 FKAGSIQLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLY 596

Query: 595 DPPLSEVAQQRLDILRRSDDGFEIAEKDLELRGGGDPLGLKQSGFPAYRLADPVAHRDLI 654
             PLS  A QRL +LR S+DGF IA+KDLE+RG G+ LG KQ+G    ++AD V  + LI
Sbjct: 597 KAPLSHTATQRLGVLRDSNDGFVIAQKDLEIRGPGEVLGTKQTGIADMKIADLVRDQALI 656