Pairwise Alignments

Query, 278 a.a., 23S rRNA Gm2251 methyltransferase from Caulobacter crescentus NA1000 Δfur

Subject, 249 a.a., RNA methyltransferase, TrmH family, group 3 (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  108 bits (270), Expect = 1e-28
 Identities = 72/205 (35%), Positives = 107/205 (52%), Gaps = 7/205 (3%)

Query: 65  TPDRAKRLAPHLQKLTCLQVMEGQEIAKQLPQGAVHQGLALKIDEPEPLTIAELGTPAKG 124
           TPD  + +    +      ++EGQ + K    G  HQG+  ++ E   + + +L   A  
Sbjct: 36  TPDTDRLMDLCREMRVRFSLVEGQVLDKLYAGG--HQGVVARLFEAGYVELDDLLQDAPD 93

Query: 125 ----FLVMLDQITDPQNIGAIFRSAAAFGAKGVILQDRHAPALSGVLAKTAVGAVDKAPY 180
                ++ LDQ+ DP N G + RS  A G  G+I+   +A  L     + A GA++K P 
Sbjct: 94  APLPLIIALDQVQDPGNAGTLARSLYALGGAGLIVPRHNAAYLGAGAHRAAAGALEKLPV 153

Query: 181 ARVVNLSRALEELADLGWRAV-ALAGEAEQSLDAVLDSQPTVLVLGSEGEGVRRLVAEHC 239
           ARV NL+RAL+E A+ G+    A+ GE   +        P VLVLG+E +G+R  VA+ C
Sbjct: 154 ARVANLARALDEAAEAGYAIYGAMCGEGSVNAFTATLRTPCVLVLGNEDKGIRPNVAKRC 213

Query: 240 DALGKIPMPGGFESLNVSAAAAIAL 264
           D L  IPM   F+S NV+ A A+ L
Sbjct: 214 DTLLHIPMLRDFDSFNVAQAGALLL 238