Pairwise Alignments

Query, 977 a.a., TonB-dependent outer membrane receptor from Caulobacter crescentus NA1000 Δfur

Subject, 853 a.a., TonB-dependent receptor, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  148 bits (373), Expect = 2e-39
 Identities = 100/269 (37%), Positives = 142/269 (52%), Gaps = 22/269 (8%)

Query: 5   RRHLLASTIIAGLAVSAALPAMAQTAQPAQAPATEVEAVVVTGSRIKRNEFNSPDPVQVV 64
           +R  +AS I   +  S A  A   ++  A     +VE + VTGSRI+R +  +  PV V+
Sbjct: 3   KRTKVASAINLAVVSSIAAGAFVASSAFAAEETAKVERIEVTGSRIQRQDMETASPVTVI 62

Query: 65  TAEQGRLQGIGSTGALLQSATIASGSPQVNAAISSAFITDGGPGAETISLRGLGANRTLV 124
            A   + +G  S   +LQ  T  +G     AA+ S    +G  G   + LRG+G+ RTLV
Sbjct: 63  DAAAIKAEGFTSVDQMLQVQTSMAG-----AAVGST-TNNGADGVAQVDLRGMGSQRTLV 116

Query: 125 LLNGRRAGPAGVRGGVSAFDLNVLPMAITERIDILKDGASSIYGSDAVAGVVNIITKRNT 184
           LLNGRR   +G  G  SA DLN +P+A+  R++ILKDGAS++YGSDA+AGVVNIITK++ 
Sbjct: 117 LLNGRRMVNSG-SGADSAVDLNSIPVAMIARVEILKDGASAVYGSDAIAGVVNIITKKDF 175

Query: 185 DGVDLDMFYSQPQKQGGEEFRASAAWAKSFDRGFFSMAYEYNKRAEQTKGQRPF------ 238
           +G   DM  S   K  G+    SA +  + D G ++    Y+ R    +G R +      
Sbjct: 176 EGFQFDMNGSGTDKGDGQSGDVSALYGFNTDGGNYTFGAAYSDRRGVIQGDRDWYDPLDN 235

Query: 239 ------TSCGRQYIFDAQG---KRKDTID 258
                 T    Q + DA G   KR +T D
Sbjct: 236 TSSIIPTGTLNQKVIDANGNWVKRTETYD 264



 Score =  115 bits (288), Expect = 1e-29
 Identities = 108/442 (24%), Positives = 187/442 (42%), Gaps = 58/442 (13%)

Query: 529 KQLVLEGSMSGDLFRLPAGPVGAAVGFHYRKDSINDVPGPITLAGNIWNSSAAGITKGDD 588
           +Q  L   ++G+LF L AG VG A+G  YR++S    P P+ +AG+   ++    T G+ 
Sbjct: 451 EQQTLSAGLNGELFDLSAGAVGFAIGAEYRRESGFYNPDPVVVAGDS-TAAQQDPTSGNY 509

Query: 589 LAREVYGELSIPVLRDVFLAERVDLSVSGRHTKINSYGEQDTYKLGLNWQIIPSVRLRAT 648
               ++ E+S+P        E++    + R    +++G+  T+K+GL +     + +R  
Sbjct: 510 NVISIFEEVSVP------FTEKLTGEFALRLDDYSTFGKATTWKIGLTYTATDELMVRTV 563

Query: 649 QGTSFRAPALFELYKNAETSFSGQRSIDPCIRWATNLAQGLITQKLANNCRAAGVPGTHS 708
             T FRAP++ ELY     SF           + TN                   P   +
Sbjct: 564 AATGFRAPSVAELYGGNSGSFD----------YLTN-------------------PWLPA 594

Query: 709 GSGASATITSSGGKGNLEAETSKAVTYGVIWSPKFAD-LQVAVDYFDIKIDGEIRRLGAA 767
                  + +     +L+ E S++ T G+++SP + D + + +DY+  K+   I R    
Sbjct: 595 SEQTGQILVNRTSDPDLKPEESESYTAGLVYSPSYIDGMSITLDYWRFKVTDAIARADVQ 654

Query: 768 NIVRGCYTSDNFPNDSLCKLFTRNASNLISTVTNNYINIAEQKNRGIDLTVSYGQQL-PW 826
             +  C+  D       C  F   A   +  +T+   N+  Q   GID  ++Y  +L   
Sbjct: 655 VGLDACHAGD----AEACSTFNITADGDLFNLTSALTNVGSQDTSGIDFNLAYNFELFGL 710

Query: 827 DVKMNVDLQSTWQLKDTIALFADTVEDNNGFVGDPDWTGRLNFRFT--KNDWTAFWGINM 884
           D K++ D     + +     +  T++ N G         R NF  +  ++DW+  +    
Sbjct: 711 DWKVSNDTTYLIKFEQDGENYTGTIDGNMGAYA----RVRNNFSISAGQDDWSVMYFNRY 766

Query: 885 IGKASDAETEATQNAAGTTFYKVH-TEFTAYHNIS-LQKKFDGFTILGGVSNVFNETPPA 942
           I   +D  T+   +A    F  V   +   YHNIS      D  T+  GV N+ +E P  
Sbjct: 767 IRSMTDVYTD--YDANDNPFVAVRGVDSILYHNISGTYHVSDNTTVSLGVKNLTDEKPLY 824

Query: 943 VTLGQGE------YDTVGGSVF 958
           VT G         YDTVG +++
Sbjct: 825 VTNGSDAGTVPQVYDTVGRTIY 846