Pairwise Alignments

Query, 356 a.a., RecA protein from Caulobacter crescentus NA1000 Δfur

Subject, 363 a.a., recombinase RecA from Rhodopseudomonas palustris CGA009

 Score =  529 bits (1363), Expect = e-155
 Identities = 262/359 (72%), Positives = 315/359 (87%), Gaps = 4/359 (1%)

Query: 1   MTSQAALKLVAKEEGDKQRALEAALAQIDRAFGKGSVMKLGEKGK-VEIESVSTGSLGLD 59
           M +  AL++V     DK +AL AAL+QI+R FGKGSVM+LG+  + ++IE++S+GSLGLD
Sbjct: 1   MAAPTALRIVEGSSMDKSKALSAALSQIERQFGKGSVMRLGKNDRSMDIETISSGSLGLD 60

Query: 60  IALGIGGLPKGRIVEVYGPESSGKTTLALHVVAEVQKAGGTAAFVDAEHALDPSYAYKLG 119
           IALG+GGLPKGRIVE+YGPESSGKTTLALH VAE QK GG  AFVDAEHALDP YA KLG
Sbjct: 61  IALGVGGLPKGRIVEIYGPESSGKTTLALHCVAEAQKKGGICAFVDAEHALDPVYARKLG 120

Query: 120 VNLDNLLVSQPDNGEQALEITDTLVRSGAVDIVVVDSVAALTPKAEIEGEMGDSLPGLQA 179
           VN+D+LL+SQPD+GEQALEI DTLVRSGA+D+++VDSVAAL P+AE+EGEMGD+LPGLQA
Sbjct: 121 VNVDDLLISQPDHGEQALEIADTLVRSGAIDVLIVDSVAALVPRAELEGEMGDALPGLQA 180

Query: 180 RLMSQALRKLTASINKANTIVIFINQIRHKIGVMYGSPETTTGGNALKFYASVRLDIRRT 239
           RLMSQALRKLTASINK+NT+VIFINQIR KIGVMYGSPETTTGGNALKFYASVRLDIRR 
Sbjct: 181 RLMSQALRKLTASINKSNTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRI 240

Query: 240 GSVKARDEIVGNNVRVKVVKNKVAPPFREVEFDIMYGEGISKLGEVIDLGVKAGIIDKAG 299
           G +K RDE+VGN  RVKVVKNK+APPF++VEFDIMYGEG+SK+GE++DLGVKAGI++K+G
Sbjct: 241 GQIKERDEVVGNQTRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSG 300

Query: 300 SWFSYGSQRIGQGRDNVREFLKNNPDVAADIEKAVRKSSQKIEEELLVGGPE---EGEE 355
           +WFS+ SQR+GQGR+N + FLK NPD+ A IE A+R++S  I E++L G PE   +GEE
Sbjct: 301 AWFSHDSQRLGQGRENAKAFLKANPDMTAKIEAAIRQNSGLIAEQILAGSPESDADGEE 359