Pairwise Alignments

Query, 356 a.a., RecA protein from Caulobacter crescentus NA1000 Δfur

Subject, 353 a.a., recombinase RecA from Escherichia coli Nissle 1917

 Score =  443 bits (1140), Expect = e-129
 Identities = 220/335 (65%), Positives = 273/335 (81%), Gaps = 8/335 (2%)

Query: 16  DKQRALEAALAQIDRAFGKGSVMKLGEKGKVEIESVSTGSLGLDIALGIGGLPKGRIVEV 75
           +KQ+AL AAL QI++ FGKGS+M+LGE   +++E++STGSL LDIALG GGLP GRIVE+
Sbjct: 6   NKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEI 65

Query: 76  YGPESSGKTTLALHVVAEVQKAGGTAAFVDAEHALDPSYAYKLGVNLDNLLVSQPDNGEQ 135
           YGPESSGKTTL L V+A  Q+ G T AF+DAEHALDP YA KLGV++DNLL SQPD GEQ
Sbjct: 66  YGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQ 125

Query: 136 ALEITDTLVRSGAVDIVVVDSVAALTPKAEIEGEMGDSLPGLQARLMSQALRKLTASINK 195
           ALEI D L RSGAVD++VVDSVAALTPKAEIEGE+GDS  GL AR+MSQA+RKL  ++ +
Sbjct: 126 ALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQ 185

Query: 196 ANTIVIFINQIRHKIGVMYGSPETTTGGNALKFYASVRLDIRRTGSVKARDEIVGNNVRV 255
           +NT++IFINQIR KIGVM+G+PETTTGGNALKFYASVRLDIRR G+VK  + +VG+  RV
Sbjct: 186 SNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGENVVGSETRV 245

Query: 256 KVVKNKVAPPFREVEFDIMYGEGISKLGEVIDLGVKAGIIDKAGSWFSYGSQRIGQGRDN 315
           KVVKNK+A PF++ EF I+YGEGI+  GE++DLGVK  +I+KAG+W+SY  ++IGQG+ N
Sbjct: 246 KVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYKGEKIGQGKAN 305

Query: 316 VREFLKNNPDVAADIEKAVRKSSQKIEEELLVGGP 350
              +LK+NP+ A +IEK VR        ELL+  P
Sbjct: 306 ATAWLKDNPETAKEIEKKVR--------ELLLSNP 332