Pairwise Alignments

Query, 550 a.a., transporter, major facilitator superfamily from Caulobacter crescentus NA1000 Δfur

Subject, 439 a.a., MFS transporter from Rahnella sp. WP5

 Score =  230 bits (586), Expect = 1e-64
 Identities = 138/354 (38%), Positives = 199/354 (56%), Gaps = 18/354 (5%)

Query: 1   MGAKGQAAPA---KGRDTMVVGASSLGTVFEWYDFYLYGSLAPIITSHFFSGVNET--TG 55
           M   GQ +PA   + R  +V G  S+G   EWY+F +YG LA +I  +FF+   +T  TG
Sbjct: 1   MTRTGQISPATASQSRRALVAG--SVGNFIEWYEFGVYGYLATLIAGNFFTLEGQTGLTG 58

Query: 56  FILALLAFAAGFAIRPLGALIFGRLGDLWGRKNTFLITMLLMGVSTFVVGLLPSYAQIGV 115
            +L   +FA  F  RP+GA+IFGR+GD  GRK T +  +LLM ++T ++GLLP+YAQIGV
Sbjct: 59  LLLTYASFALAFFCRPIGAIIFGRIGDRIGRKPTLIAVVLLMTLATAIIGLLPTYAQIGV 118

Query: 116 AAPIALVLMRLVQGLALGGEYGGAATYVAEHAPPGKRGFYTSWIQTTATIGLFLSLAVIL 175
           AAP+ L LMR+ QGL  GGE+GGA + + E AP GKRG Y +W   T ++GL   +A++ 
Sbjct: 119 AAPLLLTLMRMFQGLFAGGEFGGAVSLMTEFAPKGKRGIYGAWQSFTVSLGLLTGVALVA 178

Query: 176 VARIQLGEEAFKAWGWRIPFLVSLLLLGVSLWIRLKLHESPTF-ERMIAEGKGSKKPLTE 234
           +    L E   K WGWRIPFL++L +  V+L++RLKL E+P F     AE K  K    +
Sbjct: 179 LLVQTLPEAQMKDWGWRIPFLLALPMGLVALYLRLKLDETPNFVASKKAEPKAQKTAAEK 238

Query: 235 AFGNWPNLKIVLLALVGLTMGQAVVWYTGQFYALFFLEKTLK--LDGALANTLVAVALL- 291
           A        +     + L +G+ + W  G +  L  +   L+  L       LVA  L  
Sbjct: 239 ASA------VATAKAIALGIGRMMGWSAGGYTFLVVMPSYLQTSLHATFLQALVATVLAN 292

Query: 292 IGTPFFVI-CGWLSDKIGRKPIIILGCLLAALTYFPIFKAITTYANPALAKAEA 344
           +G    ++  GWLSDKIGRK ++++      +  FP+   +    +  L K  A
Sbjct: 293 VGFALAILPSGWLSDKIGRKKVMMIAVFAVIVLSFPLLHLLQNPESSLLVKGIA 346



 Score = 52.8 bits (125), Expect = 3e-11
 Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 2/95 (2%)

Query: 458 LALLVIYVT--MVYGPIAAMLVELFPTRIRYTAMSLPYHIGNGWFGGFLPTTAFAIVAAT 515
           +A+L+   T  M+ GP  AML E+FPTR+RYT + L Y + N  F G        ++  T
Sbjct: 345 IAVLIAGATIGMIAGPGPAMLAEMFPTRVRYTGLGLSYSLSNAVFSGCAGLIITGLIKET 404

Query: 516 GDIYSGLWYPVIIAAITAVVGGLFLKDTRHNRLED 550
           G++    +Y V    ++        KD     LE+
Sbjct: 405 GNLDIPAYYVVATCVVSLFALMTLRKDDHLRELEE 439