Pairwise Alignments

Query, 975 a.a., TonB-dependent receptor from Caulobacter crescentus NA1000 Δfur

Subject, 934 a.a., TonB-dependent receptor (RefSeq) from Shewanella loihica PV-4

 Score =  216 bits (551), Expect = 4e-60
 Identities = 255/988 (25%), Positives = 401/988 (40%), Gaps = 157/988 (15%)

Query: 13  LAGASALVLCLAAPSV-VFAQQTAQDDQTVEEVV-VTGQRAAIQSAQKIKQNAEQLVDSI 70
           LA A +L L  + P+     ++  Q+D+T  EV+ V G  ++++ AQ IK+ A+ +VD++
Sbjct: 6   LAFAISLALASSLPAYGADDEEKQQNDETEMEVIEVRGILSSLKEAQSIKKEADNVVDAL 65

Query: 71  TSTDIGALPDRSVTEALQRVAGVTIARTSYGRDVDRISVEGSGVQVRGLS--WVRGELNG 128
            + DIG  PD +V EA+QR+ GV+         V+R+  EG  V VRGLS  +    LNG
Sbjct: 66  VAEDIGKFPDSNVAEAMQRIPGVS---------VNRLRGEGQSVTVRGLSGDYNVTTLNG 116

Query: 129 RDSFSAKSGRSLSFEDVPPELMAGVDVYKNPSADLVEGGVGGTVNLRTRLPFDSAKRIMA 188
           R   S   GR  +++ +  EL+ G+ V K   A L EGG+G  +N+ T  P +   ++ A
Sbjct: 117 RKIASETVGRDFNYDLIAAELIGGIQVNKTQQASLPEGGIGAIINIDTLKPLNVGSKV-A 175

Query: 189 FSADMSIGDMSKKWKPTGSALYSDRWDTNIGELGFLVSLSESQLASRTDTISVD---PYF 245
            S +    + + +  P  S L S+ +  N  ELG L+S + +   +R D+ S       +
Sbjct: 176 GSIEGYYNERAGETDPQASLLISETF--NDDELGILISANHTSSFTRFDSHSAQWGWNEW 233

Query: 246 ARTNLVAGRTVYVPGGFG-----YRSLDFERERKGIAAAVQWRPNDQWDAALTFLRSSAS 300
           +   L+      V G F        S D +RER G   A+QWRP    D     L +   
Sbjct: 234 SEAELMPNGDPNVSGRFPSWPNIMVSTD-QRERSGGTLALQWRPTPNLDINFDALYTKYE 292

Query: 301 QASTERAVGFNPGSTNGPAAGTTFTYDSAGHFLKGTLAQSPGGNSLGSSTLDTRFADRSS 360
             ST   +                 + + GH    T+ +    +S   + L      R S
Sbjct: 293 IESTGNMISLALFEGTNLDNIQDVQFGADGHTNSITIGEPGNMDSPAIAELLESQNPRDS 352

Query: 361 VTSDYALKVNYNPNDKWAFSADIQYIYAKTKTVDFTVFNALGSDAAPATLDLTGDLPAIT 420
                 L +NY   D + F+ D+ Y  A+             + AA + + +   +  +T
Sbjct: 353 DAMQVGLNLNYIW-DNFNFNFDLAYSEAED------------ASAAVSWVVVRTAIDTLT 399

Query: 421 MNNNKAYTSNPASYYLSAAMDHHDRNDASEWAQRFDGAYTFDEGGWLRSFRFGVRNTYRE 480
           +N +      P   +    +D  +  D   W  R DG    D+ G      F    TY  
Sbjct: 400 VNWDNG-EQVPDISFGDTVLD--ENIDYGAWYARIDGDKVKDKTG-----NFNFNGTYEP 451

Query: 481 STTRETTYNWGAVAPSWSAPSINNLASYQGYY-ELYPFTNYFRGATNLPATFILPTASLV 539
                     G ++        N     + Y+ +  P    FR           P +  V
Sbjct: 452 DD--------GIISKVLFGTGYNMQDKGKTYWSQENPSAYTFRNGVTESEWINAPDSEKV 503

Query: 540 QNYAAGGALVAKLAAS--NGGWWGTFNGD--------------------YDSLTAGG--- 574
               AG  L   L A+  N G +  F G                     Y SL +     
Sbjct: 504 D--IAGNTLWGPLPATALNPGNFDDFMGSSNAMLPNTWAGINIPGLFDYYRSLDSEAFDQ 561

Query: 575 --------SGGGVNRQKEKTLAAYALLRFGNEVSLWGEAREIDGNIGLRVVKTESEGKGL 626
                   +GG     KE+T+ AYA L   +E++      +     GLR + T     G 
Sbjct: 562 YLVPRPNLTGGNTYGVKEETIHAYAELILEDEIASMPYMLDF----GLRYIDTTVTSWGY 617

Query: 627 Q------LFSRNN--TPTVPAAELAFGNGARRDLTGGRDYVSVLPSLNARLKITPQMFLR 678
                   F  N   T  V    L    G         +Y  +LPS N +L +T  +  R
Sbjct: 618 SQDPANIAFDENGLFTDAVDTVGLVEFEG---------NYNKLLPSFNGKLGLTDDLVWR 668

Query: 679 FAAAKSIVRPDFGQLQPFFSIGATNGYLNGSVCSTSIPDGAQSNCVFQYTATGGNPELKP 738
            + +++I RP    L P  SI              + P+    N +++      +P L+P
Sbjct: 669 LSLSQAISRPPLTNLSPVTSIWQNE--------EKTPPE----NFIYE-----NDPGLEP 711

Query: 739 TRSTQYDLAYEWYFASTGSLTATVFYKDIYNFVTNGVNTVKFTNNGVTRDVLVTQPYN-- 796
             + Q D   EWY++ +G+L    +YK+++ FV       + T NG + +  VT+PYN  
Sbjct: 712 YYADQLDTTLEWYYSDSGTLNLAFYYKELHGFVI--YEPTRETINGASFE--VTRPYNDD 767

Query: 797 AGHGTIKGFEVAYQQYF-SFLPGALKGLGTQANFTYIDSEGARNAASNPYDTSQVSSLVG 855
                I+G+E+ + Q F  FLP AL G G QAN+TY +SE                    
Sbjct: 768 ENQSRIRGYELNWLQTFDDFLPDALAGFGVQANYTYNNSESGEYTDDG------------ 815

Query: 856 GARDDLPLEGLSKTSYNVAALYDLGKVSARLAYNWRERF-LQTTSAANKNIPAW------ 908
              + LP +GLS   YNV A Y+   +   +AYN+R  + L      +  +  W      
Sbjct: 816 ---EQLPFKGLSDHQYNVVAFYENHGLKVNVAYNYRSEYSLGKQWYWSNALNDWTSETLQ 872

Query: 909 FDDYGQLDGSIFYTIDDNLKVGFQAVNL 936
            D++GQLD  + Y + DN+ + F+A NL
Sbjct: 873 VDEWGQLDMQVGYDVTDNITLTFEANNL 900