Pairwise Alignments

Query, 975 a.a., TonB-dependent receptor from Caulobacter crescentus NA1000 Δfur

Subject, 941 a.a., 1-(5-phosphoribosyl)-5- (RefSeq) from Shewanella sp. ANA-3

 Score =  219 bits (557), Expect = 9e-61
 Identities = 260/1001 (25%), Positives = 402/1001 (40%), Gaps = 146/1001 (14%)

Query: 1   MQRLDSSHRKLMLAGASALVLCLAAPSVVFAQQTAQDDQTVEEVVVTGQRAAIQSAQKIK 60
           M R   S   L L  A A +   AA  V      A+D + +E + V G R ++  +   K
Sbjct: 1   MMRFKPSLLTLALVAAGASMHSYAADDVKEKDLKAKDAE-IEVIQVKGFRTSVIKSLNEK 59

Query: 61  QNAEQLVDSITSTDIGALPDRSVTEALQRVAGVTIARTSYGRDVDRISVEGSGVQVRGLS 120
           +  + + +SI++ D+GALPD+S+ +AL R+ GVT  RT           + SG+ +RGL 
Sbjct: 60  RFGDTVSESISADDLGALPDQSIADALTRLPGVTAVRTGG---------QASGLNIRGLD 110

Query: 121 --WVRGELNGRDSFSAKSGRSLSFEDVPPELMAGVDVYKNPSADLVEGGVGGTVNLRTRL 178
             +V   LNG +  +    R++ F+  P EL++   VYK P A L+EGGV GTV L+T  
Sbjct: 111 GDFVFATLNGHEQVTTGGKRAIEFDQYPSELISQAAVYKTPKASLIEGGVAGTVELKTAD 170

Query: 179 PFDSAKRIMAFSADMSIGDMSKKWKPTGSALYSDRWD--TNIGELGFLVSLSESQLASRT 236
           P  + K            D S      GS  ++DR D  ++  + G  +SL+  Q     
Sbjct: 171 PLKNDK------------DQSFNINARGS--FNDRADEISDAEQYGNRLSLAY-QGKFLE 215

Query: 237 DTISV--------DPYFARTNLVA------------GRTVYVPGGFGYRSLDFERERKGI 276
           DT+ V         PY A   +              G T  +  GF  +    +  R G 
Sbjct: 216 DTLGVAVGYAHLYQPYVASQFIGLRFNDDKKDVNGDGVTEAISEGFELQQKGGDDTRDGY 275

Query: 277 AAAVQWRPNDQWDA--------------ALTFLRSSASQASTERAVGFNPGSTNGPAAGT 322
            AA+ W+P+D                  A  F   S    +   AV  N   T G  +  
Sbjct: 276 MAAIHWQPSDSLSVKGDLFHSKFTSENFARGFRVKSLKNGTISDAVVENGSMTGGTVSVG 335

Query: 323 TFTYDSAGHFLKGTLAQSPGGNSLGSSTLDTRFADRSSVTSDYALKVNYNPNDKWAFSAD 382
           T + D    F+           + GS  L+       +V +D    V+Y+        AD
Sbjct: 336 TDSTDDFSIFVINDNDSKYSELTSGSINLEWNNGGALTVAAD----VSYS-------KAD 384

Query: 383 IQYIYAKTKTVDFTVFNALGSDAAPATLDLTGDLPAITMNNNKAYTSNPASYYLSAAMDH 442
            +++   T+ + +         A   T  L G  PA     N    ++           +
Sbjct: 385 GEFVNGGTRAILYDDIGNEVRSAESVTYQLNGLSPADVSFTNDYTNTSTLGLKEVGMWPY 444

Query: 443 HDRNDASEWAQRFDGAYTFDEGGWLRSFRFGVRNTYRESTTRETTYNWGAVAPSWSAPSI 502
           + +ND    A + D  Y  D   ++ S  FGVR   RE   + +   +G        PS 
Sbjct: 445 NQQNDLI--AYKLDFNYVLDTS-FVSSVDFGVRYAEREFNAQRSQAGYGFEYDK--NPSN 499

Query: 503 NNLASYQG-YYELYPFTNYFRGATNLPATFILPTASLVQNYAAGGALVAKLAASNGGWWG 561
             + +  G   ++  F     G  +  A        LV          A+LAA+    + 
Sbjct: 500 QPVLALNGDMAKVVDFGGELSGYPSFLAIDFNKALELVN---------AQLAATGQSPF- 549

Query: 562 TFNGDYDSLTAGGSGGGVNRQKEKTLAAYALLRFGNEVSLWGEAREIDGNIGLRVVKTES 621
           T   ++ +       G VN   E  LA Y       ++   G+ + + GN+G+RVV T+ 
Sbjct: 550 TPTANWSNNWTMIQSGAVN---EDVLAGYVQANLDFDI---GDVK-VTGNLGVRVVHTDQ 602

Query: 622 EGKGLQLFSRNNTPTVPAAELAFGNGARRDLTGGRDYVSVLPSLNARLKITPQMFLRFAA 681
              GLQ         +   +        R+  G + Y   LPSLN    +T    LRFAA
Sbjct: 603 SSTGLQQVGYGLGEAITDEQGVVSTDYIRNEVG-QTYTDYLPSLNLTFHLTENDQLRFAA 661

Query: 682 AKSIVRPDFGQLQPFFSIGATNGYLNGSVCSTSIPDGAQSNCVFQYTATGG-NPELKPTR 740
           A  + RP   +L+     G  + Y           D A +    +Y A G  +P L P  
Sbjct: 662 ASVMSRPPINKLKS----GMGSWY-----------DNASTEGYKKYNAWGNTSPLLDPFY 706

Query: 741 STQYDLAYEWYFA-STGSLTATVFYKDIYNFVTN-GVNTVKFTNNG-VTRDVLV------ 791
           + QYDL+YE YF  S G++   +FYKDI +F+ +  +    F  NG +  D ++      
Sbjct: 707 ADQYDLSYEHYFEESEGAVVIALFYKDIKSFINDFTIQNYDFEANGFIVPDTIIDNGVEF 766

Query: 792 ----------TQPYNAGHGTIKGFEVAYQQYFSFLPGALKGLGTQANFTYIDSEGARNAA 841
                     T   N   G I+G E+ Y Q F FLP  L GLG   +++Y DSE      
Sbjct: 767 PVVKNEGQYQTAINNDNGGYIRGIELGYTQVFDFLPSPLDGLGFTGSYSYSDSE------ 820

Query: 842 SNPYDTSQVSSLVGGARDDLPLEGLSKTSYNVAALYDLGKVSARLAYNWRERFLQTTSAA 901
                  + ++ + G+   +PL GLS+   N    Y L     R++  +R  ++    A 
Sbjct: 821 ------VEFTTDLSGSNLTIPLPGLSENVLNTTLFYTLDGFDTRVSMRYRSGYVSEQVAV 874

Query: 902 NKNIPAWFDDYGQLDGSIFYTIDDNLKVGFQAVNLTNTKTK 942
              + A+FD    +D    Y +D+ LK  FQ  NLT+  +K
Sbjct: 875 ESQL-AFFDAETIVDYQASYALDNGLKFLFQINNLTDEPSK 914