Pairwise Alignments

Query, 969 a.a., isoleucyl-tRNA synthetase from Caulobacter crescentus NA1000 Δfur

Subject, 940 a.a., isoleucyl-tRNA synthetase (RefSeq) from Shewanella amazonensis SB2B

 Score =  671 bits (1731), Expect = 0.0
 Identities = 392/970 (40%), Positives = 536/970 (55%), Gaps = 76/970 (7%)

Query: 10  DYRETVFLPDTPFPMRAGLPKKEPEILEGWAALSEKGLYGAVRQKRQAAGAPLFVFHDGP 69
           DY+ T+ LP+T FPMR  L  +EP +LE W   ++  LY  +R  R   G   F+ HDGP
Sbjct: 3   DYKSTLNLPETEFPMRGNLANREPAMLERW---NKDKLYQQIRDSR--IGRKPFILHDGP 57

Query: 70  PYANGAIHIGHALNKILKDFVVRSRFALGYDVDYVPGWDCHGLPIEWKIEEQFRAKGRRK 129
           PYANG+IHIGH++NKILKD +++S+   G+D  YVPGWDCHGLPIE K+E++    G++ 
Sbjct: 58  PYANGSIHIGHSVNKILKDIIIKSKTLAGFDAPYVPGWDCHGLPIELKVEQKVGKPGQK- 116

Query: 130 DEVPAEEFRRECRAYAGGWIEAQKTEFQRLGVLGDWWNRYATMDFTSEAKIVEEFHKFLA 189
             + A EFR ECR YA   ++ Q+ +F RLGVLGDW   Y TMDF +EA IV    K ++
Sbjct: 117 --ISAAEFREECRKYAAAQVDGQREDFIRLGVLGDWHKPYLTMDFATEANIVRSLAKVIS 174

Query: 190 TGQLYRGSKPVMWSPVERTALADAEIEYHDHVSPTIWVKFPVVQGSDAAVGAK------- 242
            G L +G KPV W     +ALA+AE+EY D  SP I V F VV     A+ AK       
Sbjct: 175 NGHLQKGVKPVHWCTDCGSALAEAEVEYEDKTSPAIDVGFNVVD--KPALLAKFGVAQYN 232

Query: 243 ----LVIWTTTPWTIPANRAVSYNPDIPYSVFEVTALEEGLEFEPWAKPGDRLIIADKLA 298
               +VIWTTTPWT+PANRA++   D+ Y +   T  +              +++AD L 
Sbjct: 233 HDIAMVIWTTTPWTLPANRALAIAADLEYVLVSFTKEDVTRA----------IVVADVLH 282

Query: 299 EDVFKAAKVASWKT---VEAVDCEGMVLAHPLADLDSHYGYAVPMLAGDHVTDDAGTGFV 355
           ED  K     S++    ++  + E    AHP  D D      VP++ GDHVT DAGTG V
Sbjct: 283 EDCVKRFGAESFEVLGRIKGSELELTRFAHPFLDFD------VPVILGDHVTTDAGTGVV 336

Query: 356 HTAPGHGADDYQVWLAHGHREIPDTVDPDGAYYPHVALFAGLKVLETEGKKVGKFGPANG 415
           HTAPGHG DD+ V   +G  E+ + V  +G Y      FAG  V +           AN 
Sbjct: 337 HTAPGHGQDDFVVGQKYG-LEVANPVGDNGVYKADTPFFAGQHVFK-----------AND 384

Query: 416 AVMEKLIEAGNLLARGRVEHSYPHSWRSKAPVIFRNTPQWFIRMDHAVDSLDGKTLREVA 475
            V+  L E G LL      HSYPH WR K P+IFR TPQWFI       S+D + LR  A
Sbjct: 385 NVVALLKEKGALLNHVAYRHSYPHCWRHKTPIIFRATPQWFI-------SMDNQGLRSTA 437

Query: 476 VQAIADTAFYPDGGRNRIGAMVETRPDWLISRQRNWGTPLAMFVDKHTG--HPLNDPEVN 533
           +  I +T + PD G++RI  MV  RPDW ISRQR WG P+ +FV+K     HP N   + 
Sbjct: 438 LSEIQNTQWIPDWGQSRIETMVANRPDWCISRQRTWGVPITLFVNKENEELHP-NSVSLM 496

Query: 534 ARILAAIREGGADAWFTRPDADFLGAHDPAQYEKITDILDVWFDSGCTHAFTIEGRAD-S 592
            R+   I + G  AW+    A+ LG  +  QY K+TD LDVW+DSG T    +  R +  
Sbjct: 497 ERVANRIEQHGIQAWWDLDAAELLG-DEAEQYRKVTDTLDVWYDSGSTFETVVAARPEFQ 555

Query: 593 AWPADLYLEGSDQHRGWFQSSLLEGCGTRGRAPYKAVVTHGFTMDENGEKMSKSRGNTIE 652
               DLYLEGSDQHRGWF SSL+       +APYK V+THGFT+D  G KMSKS GN I 
Sbjct: 556 GHGVDLYLEGSDQHRGWFMSSLMLSTAMHAKAPYKQVLTHGFTVDGKGRKMSKSIGNVIA 615

Query: 653 PQTITKESGAEILRLWTAMVDYQEDQRIGKTILATTTDAYRKLRNTMRYLLGALAGFDEE 712
           PQ +T + GA+ILRLW A  DY  +  +   IL    D+YR++RNT R+LL  L GF+ E
Sbjct: 616 PQEVTNKLGADILRLWVAATDYSGEMSVSDEILNRAADSYRRIRNTGRFLLANLNGFEPE 675

Query: 713 ERVTDYDQFPALEKYILHRLWELDGQVREAYQSYRFSDVIRPLIEFCQGDLSALYFDVRR 772
             +       AL+++++ R  ++  ++  AY+ Y F  V   L++FC  +L + Y D+ +
Sbjct: 676 ADMVAVADMVALDRWMVRRAAKVQSEIIAAYEQYNFHLVTHKLMQFCSVELGSFYLDIIK 735

Query: 773 DSLYCDRPDALKRRAYRTALDYVFDRLTIWLAPLASFTMEEAWTTRFPEAGPVAYRVMPE 832
           D  Y  + ++  RR+ ++AL ++ + +  W+AP+ SFT +E W  +       AY    E
Sbjct: 736 DRQYTAKRESHARRSCQSALFHIAEAMVRWIAPVLSFTADEIW--QLLPGKREAYVFTQE 793

Query: 833 RVD-----AWRNDAEAARWAKVEKVTSVVTGALEVERREKRIGSALEAAPVVHFADEDLL 887
             +        +D   + W  +  V + V   LE  RR+K +G +LEA  V  +AD +L 
Sbjct: 794 WYEGLESITLESDLADSHWELLLSVRNEVNKELEQARRDKVLGGSLEAT-VTLYADTELA 852

Query: 888 A--AFEGLDAGEVFRTSSATLVAGDAG--AFRVDEVKGVSVDPNKAEGKKCARSWRILPE 943
           A  A  G +   V  TS A ++  DA   +    E+ G+ V   K E  KC R W    +
Sbjct: 853 AKVAVLGDELRFVLLTSDAKVLPIDAAPESAVATELAGLKVLVAKTEAAKCERCWHHRED 912

Query: 944 VGTDPRYPEL 953
           VG+   +P L
Sbjct: 913 VGSVEAHPSL 922