Pairwise Alignments

Query, 969 a.a., isoleucyl-tRNA synthetase from Caulobacter crescentus NA1000 Δfur

Subject, 940 a.a., isoleucyl-tRNA synthetase (RefSeq) from Shewanella sp. ANA-3

 Score =  693 bits (1788), Expect = 0.0
 Identities = 406/983 (41%), Positives = 545/983 (55%), Gaps = 96/983 (9%)

Query: 10  DYRETVFLPDTPFPMRAGLPKKEPEILEGWAALSEKGLYGAVRQKRQAAGAPLFVFHDGP 69
           DY+ T+ LP+T FPMR  L  +EPE+LE W   ++ GLY  +R  R   G   F+ HDGP
Sbjct: 3   DYKFTLNLPETEFPMRGNLANREPEMLERW---TKDGLYQQIRDSR--IGRTPFILHDGP 57

Query: 70  PYANGAIHIGHALNKILKDFVVRSRFALGYDVDYVPGWDCHGLPIEWKIEEQFRAKGRRK 129
           PYANG+IHIGH++NKILKD +V+S+   G+D  YVPGWDCHGLPIE K+E++    G++ 
Sbjct: 58  PYANGSIHIGHSVNKILKDIIVKSKTMSGFDAPYVPGWDCHGLPIELKVEQKVGKPGQK- 116

Query: 130 DEVPAEEFRRECRAYAGGWIEAQKTEFQRLGVLGDWWNRYATMDFTSEAKIVEEFHKFLA 189
             + A EFR ECR YA   ++ Q+ +F RLGVLGDW   Y TMDF +EA IV    K + 
Sbjct: 117 --ISAAEFREECRKYAAEQVDGQRADFIRLGVLGDWQKPYLTMDFATEANIVRSLSKVIE 174

Query: 190 TGQLYRGSKPVMWSPVERTALADAEIEYHDHVSPTIWVKFPVVQG---------SDAAVG 240
            G L++G KPV W     +ALA+AE+EY D  SP I V F              SD +  
Sbjct: 175 NGHLHKGVKPVHWCTDCGSALAEAEVEYEDKTSPAIDVAFTATDSKALAAQFGVSDYSHP 234

Query: 241 AKLVIWTTTPWTIPANRAVSYNPDIPYSVFEVTALEEGLEFEPWAKPG--DRLIIADKLA 298
             +VIWTTTPWT+PANRA+S +P++ YS+ E            +AK G    +I+AD L 
Sbjct: 235 VAMVIWTTTPWTLPANRALSISPELDYSLVE------------FAKEGATHAVILADVLV 282

Query: 299 EDVFKAAKVASWKT---VEAVDCEGMVLAHPLADLDSHYGYAVPMLAGDHVTDDAGTGFV 355
           E         S      V+ V  E +   HP    D      VP + GDHVT DAGTG V
Sbjct: 283 EACMTRYGAESHSVLGKVKGVALELVRFKHPFLAFD------VPAILGDHVTTDAGTGVV 336

Query: 356 HTAPGHGADDYQVWLAHGHREIPDTVDPDGAYYPHVALFAGLKVLETEGKKVGKFGPANG 415
           HTAPGHG DD+ V   +G  E+ + V  +G Y P    FAG  V +           AN 
Sbjct: 337 HTAPGHGQDDFVVGQKYG-LEVANPVGDNGVYKPDTEFFAGQHVFK-----------AND 384

Query: 416 AVMEKLIEAGNLLARGRVEHSYPHSWRSKAPVIFRNTPQWFIRMDHAVDSLDGKTLREVA 475
            V+  L E G LL      HSYPH WR K P+IFR TPQWFI       S+D + LR+ A
Sbjct: 385 NVVALLKEKGALLHHVAYRHSYPHCWRHKTPIIFRATPQWFI-------SMDNQNLRKQA 437

Query: 476 VQAIADTAFYPDGGRNRIGAMVETRPDWLISRQRNWGTPLAMFVDKHTG--HPLNDPEVN 533
           +  I  T + PD G++RI  MVE RPDW ISRQR WG P+ +FV + T   HP +   + 
Sbjct: 438 LSEIEQTQWIPDWGQSRIEKMVENRPDWCISRQRTWGVPITLFVHRETEELHP-DSVSLM 496

Query: 534 ARILAAIREGGADAWFTRPDADFLGAHDPAQYEKITDILDVWFDSGCTHAFTIEGRAD-S 592
           AR+   I + G  AW+    A+ LG  +  QY K+TD LDVW+DSG T A  +  R +  
Sbjct: 497 ARVANRIEQEGIQAWWDLDAAELLG-EEAEQYRKVTDTLDVWYDSGSTFASVVGARPEFH 555

Query: 593 AWPADLYLEGSDQHRGWFQSSLLEGCGTRGRAPYKAVVTHGFTMDENGEKMSKSRGNTIE 652
               DLYLEGSDQHRGWF SSL+      G+APYK V+THGFT+D  G KMSKS GN I 
Sbjct: 556 GHGVDLYLEGSDQHRGWFMSSLMISTAMTGKAPYKQVLTHGFTVDGKGRKMSKSIGNVIA 615

Query: 653 PQTITKESGAEILRLWTAMVDYQEDQRIGKTILATTTDAYRKLRNTMRYLLGALAGFDEE 712
           PQ +T + GA+ILRLW A  DY  +  +   IL  + DAYR++RNT R+LL  L GFD  
Sbjct: 616 PQQVTNKLGADILRLWVAATDYSGEMTVSDEILNRSADAYRRIRNTARFLLANLNGFDPA 675

Query: 713 ERVTDYDQFPALEKYILHRLWELDGQVREAYQSYRFSDVIRPLIEFCQGDLSALYFDVRR 772
           + +   +   AL+++ + R   L  ++ EAY+ Y F  V + L++FC  +L + Y D+ +
Sbjct: 676 KDLVAVEDMVALDRWAVRRAAALQQEIIEAYEQYNFHIVTQKLMQFCSVELGSFYLDIIK 735

Query: 773 DSLYCDRPDALKRRAYRTALDYVFDRLTIWLAPLASFTMEEAWTTRFPEAGPVAYRVMPE 832
           D  Y  + +   RR+ ++AL ++ + +  W+AP+ SFT +E W            +++P 
Sbjct: 736 DRQYTAKQEGHARRSCQSALFHIAEAMVRWIAPILSFTADEVW------------QLLPG 783

Query: 833 RVDA------WRNDAEA---------ARWAKVEKVTSVVTGALEVERREKRIGSALEAAP 877
           + DA      W  D ++         A W  +  V + V   +E  RR+KRIG +L+ A 
Sbjct: 784 QRDAYVFTQEWYQDLQSITLDTDLSDAYWENLLTVRNEVNKVIEQARRDKRIGGSLD-AE 842

Query: 878 VVHFADEDLLAAFE--GLDAGEVFRTSSA-TLVAGDAGAFRVD-EVKGVSVDPNKAEGKK 933
           V  FAD  L       G +   V  TS A  L   DA +  V+ E+  + ++ N    +K
Sbjct: 843 VTLFADAALTEQLTHIGDELRFVLLTSEAKVLPLADATSDAVETELASLKLEVNATTAEK 902

Query: 934 CARSWRILPEVGTDPRYPELSLR 956
           C R W    EVGT   +P L  R
Sbjct: 903 CERCWHHREEVGTIEAHPTLCHR 925