Pairwise Alignments

Query, 490 a.a., chromosome replication initiator protein DnaA from Caulobacter crescentus NA1000 Δfur

Subject, 460 a.a., chromosomal replication initiator protein DnaA (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  343 bits (879), Expect = 9e-99
 Identities = 196/466 (42%), Positives = 273/466 (58%), Gaps = 13/466 (2%)

Query: 25  NVWSKVCVALKRELGDAAFGSWIAPAMLREAATGDVVLVTSTGIARDWIRRSAWRRIGEL 84
           + W  V   L + +G   + +WI P    +   G V     +    +W+ R+    I   
Sbjct: 4   DTWGSVQNDLLKTVGQNNYLTWIEPLKFADCRGGVVRFEAPSSFVGNWVARNYREDI--- 60

Query: 85  WAAHDATGRRIDLKSRLEFEAA--AGAYVEATPKAVAAEPIEIVLPVSTDAPTVVAPSAK 142
              H      +++K R+EF+ A  A A  +  PK            V+ D P   A    
Sbjct: 61  --LHHLVSAGVEVK-RIEFDVAKLAQAARQVRPKGTERTMTPSPGDVAMDKPVPSASLQS 117

Query: 143 SPRTQGLQERFTFETFVPGPANEFAHAVARRIANWADGHFNPVLFHGPYGFGKTHLLNAL 202
           +P    L  R TF  FV G  NE AHA ARR+A      FNP+  +G  G GKTHL++A+
Sbjct: 118 AP----LDPRLTFSNFVVGKPNELAHASARRVAEGGPVSFNPLFLYGGVGLGKTHLMHAI 173

Query: 203 AWEAMRNAPEKRVVYLTAERFLSTFVRAVMDRQTAAFKEELRAADLLIIDDVHFIAGKQS 262
           AWEA    P  +V+YL+AE+F+  FVRA+ DR T  FKE  R+ DLL++DDV FIAGK S
Sbjct: 174 AWEAQARNPGLKVLYLSAEQFMYRFVRALRDRNTMEFKELFRSVDLLMVDDVQFIAGKDS 233

Query: 263 TQEELFHTLTALVGEGGRVVFSADRPPSAMTEMDAHLRSHLSAGLVCGLEPADRNLRLGI 322
           TQ+E FHT  ALV +  +++ SADR P  +  ++  ++S LS GLV  + P D  LRLG+
Sbjct: 234 TQDEFFHTFNALVDQNKQIIISADRAPGEIDGLEDRIKSRLSCGLVVDIHPTDYELRLGV 293

Query: 323 LERKIQTLGAAHGFEPSIRPEVMQFLADRFTDSVRELEGALNTLSARAGEGLSRMTLDEV 382
           L++++Q   AA G   ++   V++ LA R + +VR LEGALN L A +     R+TLD  
Sbjct: 294 LQQRLQDQIAA-GETIAVEDGVLECLAQRISTNVRVLEGALNRLIAFSDLVGRRITLDLA 352

Query: 383 QAILRPHLRSGEKRITIDDIQKATAEHYGMKQADLLSERRNRAVARPRQAAMWLAKQLTT 442
              L   +R+ +K++T+D+I +A A++Y ++  DLL  RR R +ARPRQ AM+LAK LTT
Sbjct: 353 HEALSDLIRAHDKKVTVDEIMQAVAKYYNLRMTDLLGPRRTRTIARPRQLAMYLAKTLTT 412

Query: 443 RSLPDIGRRFGGRDHTTVLHAVRRIEALRAEDSALSHDLETLTRKL 488
           RSLP+IGRRFGGRDHTTV+HAV+RIEAL   D  +S D+ +L R L
Sbjct: 413 RSLPEIGRRFGGRDHTTVIHAVKRIEALCDSDPQISEDVRSLLRTL 458