Pairwise Alignments

Query, 490 a.a., chromosome replication initiator protein DnaA from Caulobacter crescentus NA1000 Δfur

Subject, 460 a.a., chromosomal replication initiation protein (RefSeq) from Shewanella sp. ANA-3

 Score =  285 bits (728), Expect = 3e-81
 Identities = 177/470 (37%), Positives = 251/470 (53%), Gaps = 17/470 (3%)

Query: 23  AANVWSKVCVALKRELGDAAFGSWIAPAMLREAATGD-VVLVTSTGIARDWIRRSAWRRI 81
           A ++W +    L+ EL    F  WI P  L+    GD +VL        DW+R      I
Sbjct: 2   AVSLWQQCIGRLQDELSAQQFSMWIRP--LQAEMDGDTLVLYAPNRFVLDWVRDKYINII 59

Query: 82  GELWA---AHDATGRRIDLKSRLEFEAAAGAYVEATPKAVAAEPIEIVLPVSTDAPTVVA 138
            + +     +DA   R D+ SR   +    A V A    V     +    V T   T   
Sbjct: 60  NQFFTEQMGNDAPKLRFDIGSRPSAKKPEPAPVAA----VRVPNPQTKASVGTSFNTT-E 114

Query: 139 PSAKSPRTQGLQERFTFETFVPGPANEFAHAVARRIANWADGHFNPVLFHGPYGFGKTHL 198
           P A +     +   + F+ FV G +N+   A A ++A    G +NP+  +G  G GKTHL
Sbjct: 115 PVANANHRSNINPTYQFDNFVEGKSNQLGKAAALQVAENPGGAYNPLFLYGGTGLGKTHL 174

Query: 199 LNALAWEAMRNAPEKRVVYLTAERFLSTFVRAVMDRQTAAFKEELRAADLLIIDDVHFIA 258
           L+A+    ++N P+ +VVY+ +ERF+   V+A+ +     FK   R+ D L IDD+ F A
Sbjct: 175 LHAVGNGIIKNNPDAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALFIDDIQFFA 234

Query: 259 GKQSTQEELFHTLTALVGEGGRVVFSADRPPSAMTEMDAHLRSHLSAGLVCGLEPADRNL 318
            K  +QEE FHT  AL+    +++ ++DR P  +  ++  L+S    GL   +EP +   
Sbjct: 235 NKDRSQEEFFHTFNALLEGNHQIILTSDRYPKEIDGVEDRLKSRFGWGLTVAIEPPELET 294

Query: 319 RLGILERKIQTLGAAHGFEPSIRPEVMQFLADRFTDSVRELEGALNTLSARAGEGLSRMT 378
           R+ IL RK Q  G       ++  EV  F+A R   +VRELEGALN + A A      +T
Sbjct: 295 RVAILMRKAQESGI------NLPDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPIT 348

Query: 379 LDEVQAILRPHLRSGEKRITIDDIQKATAEHYGMKQADLLSERRNRAVARPRQAAMWLAK 438
           +D V+  LR  L   EK +TID+IQK  AE+Y +K AD+LS+RR+R+VARPRQ AM L+K
Sbjct: 349 IDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKMADMLSKRRSRSVARPRQVAMALSK 408

Query: 439 QLTTRSLPDIGRRFGGRDHTTVLHAVRRIEALRAEDSALSHDLETLTRKL 488
           +LT +SLP+IG  FGGRDHTTVLHA R+I  LR E   +  D   L R L
Sbjct: 409 ELTNQSLPEIGDAFGGRDHTTVLHACRKIAQLREESHDIKEDYANLIRTL 458