Pairwise Alignments

Query, 481 a.a., glutamate synthase (NADPH) small chain GltD from Caulobacter crescentus NA1000

Subject, 472 a.a., glutamate synthase, 4Fe-4S protein, small subunit from Escherichia coli BL21

 Score =  410 bits (1054), Expect = e-119
 Identities = 217/474 (45%), Positives = 294/474 (62%), Gaps = 9/474 (1%)

Query: 1   MAERMLKFTTVARKTPEKRAAAERSGDFHEIYADFIDAKATEQASRCSQCGVPFCQTHCP 60
           M++ + +F  + R  P K+    R  +F EIY  F + +A  QA RC  CG P+C+  CP
Sbjct: 1   MSQNVYQFIDLQRVDPPKKPLKIRKIEFVEIYEPFSEGQAKAQADRCLSCGNPYCEWKCP 60

Query: 61  LHNNIPDWLRMTAEGRLEEAYALSQATNSMPEVCGRICPQDRLCEGNCVIEQSGHGTVTI 120
           +HN IP+WL++  EGR+ EA  LS  TN++PEVCGR+CPQDRLCEG+C +     G VTI
Sbjct: 61  VHNYIPNWLKLANEGRIFEAAELSHQTNTLPEVCGRVCPQDRLCEGSCTLNDE-FGAVTI 119

Query: 121 GSVERYLTDKAWEMGWVKPLAAGPARGQSVGIVGAGPAGLAAAEKLREAGYDVTVYDRHD 180
           G++ERY+ DKA+EMGW   ++     G+ V I+GAGPAGLA A+ L   G    V+DRH 
Sbjct: 120 GNIERYINDKAFEMGWRPDMSGVKQTGKKVAIIGAGPAGLACADVLTRNGVKAVVFDRHP 179

Query: 181 RAGGLLIYGIPGFKLEKDVVERRTQRLADGGVVFKLGFEVGKDATLEDLRAQHDAVLIAV 240
             GGLL +GIP FKLEK+V+ RR +     G+ FKL  EVG+D  L+DL + +DAV + V
Sbjct: 180 EIGGLLTFGIPAFKLEKEVMTRRREIFTGMGIEFKLNTEVGRDVQLDDLLSDYDAVFLGV 239

Query: 241 GVYAARDLTVPGGGSKGVVPALDYLITSNRLSLGDSVPAYDSGELNAEGKDVVVVGGGDT 300
           G Y +    +    + GV  AL +LI + +  +G      D   ++ EGK VVV+GGGDT
Sbjct: 240 GTYQSMHGGLENEDADGVYAALPFLIANTKQLMGFG-ETRDEPFVSMEGKRVVVLGGGDT 298

Query: 301 AMDCVRTAIRQGAKSVTCLYRRDKANMPGSMREVANAEEEGVTFEWLAAPRALSGEAEA- 359
           AMDCVRT++RQGAK VTC YRRD+ NMPGS REV NA EEGV F++   P  +       
Sbjct: 299 AMDCVRTSVRQGAKHVTCAYRRDEENMPGSRREVKNAREEGVEFKFNVQPLGIEVNGNGK 358

Query: 360 VTGVRAIRMRLGAPDASGRQSPEEIPGGDFDRPAQLVVKALGFEPENLPEQWSAP-DLKV 418
           V+GV+ +R  +G PDA GR+  E + G +   PA  V+ A GF P N+  +W A   +++
Sbjct: 359 VSGVKMVRTEMGEPDAKGRRRAEIVAGSEHIVPADAVIMAFGFRPHNM--EWLAKHSVEL 416

Query: 419 TRWGTVKADVRNQ---MTNLDGVFAAGDIVRGASLVVWAIKDGRDAADAIHRYL 469
              G + A   +     T+   +FA GDIVRG+ LVV AI +GR AAD I  +L
Sbjct: 417 DSQGRIIAPEGSDNAFQTSNPKIFAGGDIVRGSDLVVTAIAEGRKAADGIMNWL 470