Pairwise Alignments

Query, 205 a.a., ribonuclease D from Caulobacter crescentus NA1000

Subject, 371 a.a., Ribonuclease D (EC 3.1.26.3) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 56.6 bits (135), Expect = 6e-13
 Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 3/158 (1%)

Query: 21  IAIDSETMGLRLRRDPLCVVQLSAGDGDAHVVRLSRPDYDCPNLKALLTNPKVLKLFHFG 80
           IA+D+E +  R     L ++QL  G   A +  L   D+    LKA+L +  + K  H G
Sbjct: 21  IALDTEFVRTRTYYPQLGLIQLFDGANVALIDPLGISDWS--PLKAVLRDTGITKFLHAG 78

Query: 81  RFDIAMFELHLGVVTAPVYCTKIASKLARTYTDRHGLKDVTRELLGVELSKVQQSSDWGA 140
             D+ +F    G +  P+  T+I +          G   +  E  GV L K +  +DW A
Sbjct: 79  SEDLEVFLNAFGELPEPLIDTQILAAFCGRPLS-WGFASMVEEYTGVALDKSESRTDWLA 137

Query: 141 PSLSVDQVAYAASDVLHLHGLRLKLNAMLEREGRMALA 178
             LS  Q  YAA+DV +L  +  KL    E  G +  A
Sbjct: 138 RPLSERQCEYAAADVWYLLPIAKKLMIETEAAGWLPAA 175