Pairwise Alignments

Query, 208 a.a., ribosome-associated factor Y from Caulobacter crescentus NA1000

Subject, 95 a.a., predicted ribosome-associated, sigma 54 modulation protein (NCBI) from Escherichia coli BW25113

 Score = 50.8 bits (120), Expect = 8e-12
 Identities = 29/97 (29%), Positives = 55/97 (56%), Gaps = 2/97 (2%)

Query: 1  MQVQVSGKHVDVGEALRARVSDEIALSIGKYFDRGGAAEVVVSKEGYAFRVDCSVKLASG 60
          MQ+ ++G +V++ EALR  V+ + A  + +YFDR     VV+  E      D ++ + +G
Sbjct: 1  MQLNITGNNVEITEALREFVTAKFA-KLEQYFDRINQVYVVLKVEKVTHTSDATLHV-NG 58

Query: 61 QQLISHGSGGDAHAAFDAALAKIDTRIRRYKRRLKSH 97
           ++ +   G D +AA D  + K+  ++ ++K +LK H
Sbjct: 59 GEIHASAEGQDMYAAIDGLIDKLARQLTKHKDKLKQH 95