Pairwise Alignments

Query, 615 a.a., ATP-dependent DNA helicase recQ from Caulobacter crescentus NA1000

Subject, 708 a.a., ATP-dependent DNA helicase RecQ from Pseudomonas fluorescens GW456-L13

 Score =  466 bits (1200), Expect = e-135
 Identities = 253/608 (41%), Positives = 368/608 (60%), Gaps = 19/608 (3%)

Query: 10  LDRARDVLRRTFGHADFRGLQAGVIHELLTGHSAMAVLPTGGGKSLCYQIPSLIRPGLGL 69
           L++A+ VL+  FG+  FRG Q  +I  + +G  A+ ++PTGGGKSLC+Q+P+L+R GL +
Sbjct: 2   LEQAQRVLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLREGLAV 61

Query: 70  VISPLIALMADQVQGLRQAGVAAERLDSNISMDERSDIWRRIDAGEVDLLYLSPEGLMQP 129
           V+SPLIALM DQV  L + GVAA  L+S +S +++ D+  RI  GEV +LYL+PE L+QP
Sbjct: 62  VVSPLIALMDDQVATLEELGVAAAALNSTLSAEQQRDLAARIRRGEVKMLYLAPERLVQP 121

Query: 130 WMLDRLSRTPLALIAVDEAHCVSQWGHDFRPEYRMLGRLAELFPDAPRLAVTATADARTR 189
            ML  L    ++L A+DEAHCVSQWGHDFRPEY  LG+LAE+FPD PR+A+TATAD RTR
Sbjct: 122 RMLSFLQGLDISLFAIDEAHCVSQWGHDFRPEYLQLGQLAEMFPDVPRIALTATADKRTR 181

Query: 190 DDIRAELRLQGAAEFVDSFARPELALSAERKRGKGHDRVVELVLERPGRSGVIYAGSRDG 249
           ++I   L LQ A  F+ SF RP +      K  +   +++  + ER   +G++Y  SR  
Sbjct: 182 EEIVTRLHLQDAERFLSSFDRPNIFYRIVPKE-QPRKQLLAFLAERRSDAGIVYCLSRKK 240

Query: 250 TEKLAERLNAEGVPALAYHAGLDKAVRARRLEDFLEADAAVMVATIAFGMGVDKPDVRYV 309
            E++A  L+ +G PAL YHAGL   +RA   + FL  +  +MVAT+AFGMG+DKP+VR+V
Sbjct: 241 VEEVAAFLSEQGFPALPYHAGLPNDLRAYHQKRFLNEEGLIMVATVAFGMGIDKPNVRFV 300

Query: 310 IHADPPAAIEAYWQEVGRAGRDGQPAEGITLYGSADMAWAARRIETREAPDEVKQVQSRK 369
            H D P ++EAY+QE GR GRDG PA+    YG  D+    + ++  E  +  K+++  K
Sbjct: 301 AHLDLPKSLEAYYQETGRGGRDGLPADAWMAYGLQDVVMLKQMLQNSEGDERHKRLEQHK 360

Query: 370 LRQFYAMLEGVTCRAAAVRRYFGEEGVGHCGVCDICVSPPTGIDATQAAQKALSAVHRLG 429
           L    ++ E   CR   +  YF E+    CG CD CV      DAT+ A++ALSA++R G
Sbjct: 361 LDAMLSLCEETRCRRQTLLAYFDEDMPEPCGHCDNCVDGVQTWDATEPARQALSAIYRTG 420

Query: 430 GRLGRGRVIEHLMGKTKDVTPQ--EAQLPTFGIGREFSQPTWRDLFDTLIFEGLLREDPN 487
            R G G +++ L+GK  +         L  +G+G+  ++  WR LF  L+  GL   D  
Sbjct: 421 QRYGVGHLVDVLLGKDNEKVRSFGHQHLSVYGVGKTMAEGEWRSLFRQLVARGLADID-- 478

Query: 488 DGRPLIGLGDV---EGVRQVYRNERKVALRQTTDAPDSGGRAGGGMRKRREGRALTIPAE 544
               L G G +   +  R + + E  + LR+   A           +  +   +  +  E
Sbjct: 479 ----LEGYGGLRLSDSCRPLLKGEVTLELRRDLKAQTVA-------KSSKSQASQLVRGE 527

Query: 545 NQLLFEALRSWRKEQAQLQHVPPYVIFHDATLAEIAAARPATLAALGKAGGVGQGKLDRY 604
            +  +EALR+ R++ A+   VPPYVIF D+TL E+  ++P +LA +    GVG  KL+RY
Sbjct: 528 EREQWEALRALRRKLAEEHGVPPYVIFPDSTLLEMLRSQPTSLAEMATVSGVGARKLERY 587

Query: 605 GEAVLKVV 612
           GEA L+V+
Sbjct: 588 GEAFLEVL 595