Pairwise Alignments

Query, 615 a.a., ATP-dependent DNA helicase recQ from Caulobacter crescentus NA1000

Subject, 591 a.a., ATP-dependent DNA helicase RecQ from Variovorax sp. SCN45

 Score =  436 bits (1122), Expect = e-126
 Identities = 260/592 (43%), Positives = 342/592 (57%), Gaps = 28/592 (4%)

Query: 40  GHSAMAVLPTGGGKSLCYQIPSLIRP----GLGLVISPLIALMADQVQGLRQAGVAAERL 95
           G  A+ ++PTGGGKSLCYQIP++ R     G+ +V+SPLIALM DQV  L +AGV+A  L
Sbjct: 4   GGDALVLMPTGGGKSLCYQIPAIARQRAGHGVAIVVSPLIALMHDQVGALHEAGVSAAFL 63

Query: 96  DSNISMDERSDIWRRIDAGEVDLLYLSPEGLMQPWMLDRLS----RTPLALIAVDEAHCV 151
           +S +  +E  D+ RR+  GE+ LLY +PE +  P  L +L     R  L+L A+DEAHCV
Sbjct: 64  NSTLDWEETQDVERRMLRGEITLLYAAPERVNTPRFLSQLDSLKERGKLSLFAIDEAHCV 123

Query: 152 SQWGHDFRPEYRMLGRLAELFPDAPRLAVTATADARTRDDIRAELRLQGAAEFVDSFARP 211
           SQWGHDFRPEYR L  L E +   PR+A+TATAD  TR DI   L+L+ A +FV SF RP
Sbjct: 124 SQWGHDFRPEYRALTVLHERYAGVPRIALTATADDLTRADIVERLQLEEARQFVSSFDRP 183

Query: 212 ELALSAERKRGKGHDRVVELVLERPGRSGVIYAGSRDGTEKLAERLNAEGVPALAYHAGL 271
            +  +   K+      +  +  E  G +GV+Y  SR   E +A  L   G+ AL YHAGL
Sbjct: 184 NIRYTIVEKKDATTQLLRFIEREHEGDAGVVYCQSRKRVEDVAVTLRDAGINALPYHAGL 243

Query: 272 DKAVRARRLEDFLEADAAVMVATIAFGMGVDKPDVRYVIHADPPAAIEAYWQEVGRAGRD 331
           D AVR +  + FL  +  VMVATIAFGMG+DKPDVR+V H D P  IE Y+QE GRAGRD
Sbjct: 244 DAAVRQKHQDRFLREEGIVMVATIAFGMGIDKPDVRFVGHLDMPKNIEGYYQETGRAGRD 303

Query: 332 GQPAEGITLYGSADMAWAARRIETREAPDEVKQVQSRKLRQFYAMLEGVTCRAAAVRRYF 391
           G PA+    YG  D+    R I+   A +E KQV   KL    ++ E   CR   +  YF
Sbjct: 304 GGPADAWMAYGLQDVVNQRRMIDESPAGEEFKQVMRGKLDALLSLAEASDCRRVRLLGYF 363

Query: 392 GEEGVGHCGVCDICVSPPTGIDATQAAQKALSAVHRL----GGRLGRGRVIEHLMGKTKD 447
           GE+    CG CD C++PP   D T AA+K LS ++R+    G   G G +++ L GK  +
Sbjct: 364 GEKST-PCGNCDNCLNPPQVWDGTDAARKLLSTIYRVQQLSGISFGAGHIMDILRGKATE 422

Query: 448 VTPQ--EAQLPTFGIGREFSQPTWRDLFDTLIFEGLLREDPNDGRPLIGLGDVEGVRQVY 505
              Q    ++ TFGIG EFS+   R +   LI  G L     D      L   EG R V 
Sbjct: 423 KVKQFGHERVSTFGIGAEFSEVALRGVLRQLIATGALAV---DAEAFNTLKLTEGSRAVL 479

Query: 506 RNERKVALRQTTDAPDSGGRAGGGMRKRREGRALTIPAENQL------LFEALRSWRKEQ 559
           R E +V LR++  +P    ++    R+ +  +    PA  +L       FEAL++WR E 
Sbjct: 480 RGEAQVTLRESVSSPAERSKS----RREKTVKGAPSPAAAKLDDTGKKRFEALKAWRAEV 535

Query: 560 AQLQHVPPYVIFHDATLAEIAAARPATLAALGKAGGVGQGKLDRYGEAVLKV 611
           A+  ++P YVIFHDATLA IA   PATL  L    G+G  KL+ YG  VL+V
Sbjct: 536 AKEHNLPAYVIFHDATLAAIAERAPATLEDLQGISGIGTKKLEAYGSEVLRV 587