Pairwise Alignments

Query, 615 a.a., ATP-dependent DNA helicase recQ from Caulobacter crescentus NA1000

Subject, 609 a.a., ATP-dependent DNA helicase (NCBI) from Escherichia coli BW25113

 Score =  426 bits (1095), Expect = e-123
 Identities = 249/606 (41%), Positives = 344/606 (56%), Gaps = 23/606 (3%)

Query: 13  ARDVLRRTFGHADFRGLQAGVIHELLTGHSAMAVLPTGGGKSLCYQIPSLIRPGLGLVIS 72
           A+ VL+ TFG+  FR  Q  +I  +L+G   + V+PTGGGKSLCYQIP+L+  GL +V+S
Sbjct: 13  AKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVS 72

Query: 73  PLIALMADQVQGLRQAGVAAERLDSNISMDERSDIWRRIDAGEVDLLYLSPEGLMQPWML 132
           PLI+LM DQV  L+  GVAA  L+S  + +++ ++      G++ LLY++PE LM    L
Sbjct: 73  PLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRLLYIAPERLMLDNFL 132

Query: 133 DRLSRTPLALIAVDEAHCVSQWGHDFRPEYRMLGRLAELFPDAPRLAVTATADARTRDDI 192
           + L+     L+AVDEAHC+SQWGHDFRPEY  LG+L + FP  P +A+TATAD  TR DI
Sbjct: 133 EHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTATADDTTRQDI 192

Query: 193 RAELRLQGAAEFVDSFARPELALSAERKRGKGHDRVVELVLERPGRSGVIYAGSRDGTEK 252
              L L      + SF RP +      K  K  D+++  V E+ G+SG+IY  SR   E 
Sbjct: 193 VRLLGLNDPLIQISSFDRPNIRYMLMEK-FKPLDQLMRYVQEQRGKSGIIYCNSRAKVED 251

Query: 253 LAERLNAEGVPALAYHAGLDKAVRARRLEDFLEADAAVMVATIAFGMGVDKPDVRYVIHA 312
            A RL ++G+ A AYHAGL+  VRA   E F   D  ++VAT+AFGMG++KP+VR+V+H 
Sbjct: 252 TAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHF 311

Query: 313 DPPAAIEAYWQEVGRAGRDGQPAEGITLYGSADMAWAARRIETREAPDEVKQVQSRKLRQ 372
           D P  IE+Y+QE GRAGRDG PAE +  Y  ADMAW  R +E  +   +++ ++  KL  
Sbjct: 312 DIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLE-EKPQGQLQDIERHKLNA 370

Query: 373 FYAMLEGVTCRAAAVRRYFGEEGVGHCGVCDICVSPPTGIDATQAAQKALSAVHRLGGRL 432
             A  E  TCR   +  YFGE     CG CDIC+ PP   D +  AQ ALS + R+  R 
Sbjct: 371 MGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGSTDAQIALSTIGRVNQRF 430

Query: 433 GRGRVIEHLMGKTKDVTPQ--EAQLPTFGIGREFSQPTWRDLFDTLIFEGLLREDPNDGR 490
           G G V+E + G            +L  +G+GR+ S   W  +   LI  GL+ ++     
Sbjct: 431 GMGYVVEVIRGANNQRIRDYGHDKLKVYGMGRDKSHEHWVSVIRQLIHLGLVTQNIAQHS 490

Query: 491 PLIGLGDVEGVRQVYRNERKVAL---RQTTDAPDSGGRAGGGMRKRREGRALTIPAENQL 547
               L   E  R V R E  + L   R     P +  ++ GG   R+             
Sbjct: 491 ---ALQLTEAARPVLRGESSLQLAVPRIVALKPKAMQKSFGGNYDRK------------- 534

Query: 548 LFEALRSWRKEQAQLQHVPPYVIFHDATLAEIAAARPATLAALGKAGGVGQGKLDRYGEA 607
           LF  LR  RK  A   +VPPYV+F+DATL E+A   P T + +    GVG  KL+R+G+ 
Sbjct: 535 LFAKLRKLRKSIADESNVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKP 594

Query: 608 VLKVVR 613
            + ++R
Sbjct: 595 FMALIR 600