Pairwise Alignments

Query, 510 a.a., ATP synthase alpha chain from Caulobacter crescentus NA1000

Subject, 513 a.a., F1 sector of membrane-bound ATP synthase, alpha subunit from Escherichia coli BL21

 Score =  577 bits (1486), Expect = e-169
 Identities = 302/519 (58%), Positives = 383/519 (73%), Gaps = 20/519 (3%)

Query: 1   MDIRAAEISAILKSQIANFGEEAAVSDVGQVLSVGDGIARIYGLDNVQAGEMLEFPKAGV 60
           M + + EIS ++K +IA F   +   + G ++SV DG+ RI+GL +   GEM+  P    
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLADCMQGEMISLP-GNR 59

Query: 61  KGMALNLERDNVGAVIFGQDQEIKEGDEVRRLGEIVDVPVGRGLLGRVVNPLGEPIDGKG 120
             +ALNLERD+VGAV+ G   ++ EG +V+  G I++VPVGRGLLGRVVN LG PIDGKG
Sbjct: 60  YAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPIDGKG 119

Query: 121 PIQYTERRRVDVKAPGIIPRKSVHEPVQTGLKSIDTLIPVGRGQRELIIGDRQTGKTAVA 180
           P+ +     V+  APG+I R+SV +PVQTG K++D++IP+GRGQRELIIGDRQTGKTA+A
Sbjct: 120 PLDHDGFSAVEAIAPGVIERQSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGKTALA 179

Query: 181 IDTILNQKAVNAGKDESAKLYCVYVAIGQKRSTVAQIVKTLEEHGALEYTTVVVASASEP 240
           ID I+NQ+         + + C+YVAIGQK ST++ +V+ LEEHGAL  T VVVA+ASE 
Sbjct: 180 IDAIINQR--------DSGIKCIYVAIGQKASTISNVVRKLEEHGALANTIVVVATASES 231

Query: 241 APLQYLAPFAGCAMGEWFRDNGLHGLIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVF 300
           A LQYLAP+AGCAMGE+FRD G   LIIYDDLSKQAVAYRQ+SLLLRRPPGREA+PGDVF
Sbjct: 232 AALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVF 291

Query: 301 YLHSRLLERAAKLNED-----------NGSGSLTALPIIETQANDVSAYIPTNVISITDG 349
           YLHSRLLERAA++N +             +GSLTALPIIETQA DVSA++PTNVISITDG
Sbjct: 292 YLHSRLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDG 351

Query: 350 QIFLETDLFYQGIRPAVNVGISVSRVGSSAQIKAMKQVAGPIKGELAQYREMAAFAKFGS 409
           QIFLET+LF  GIRPAVN GISVSRVG +AQ K MK+++G I+  LAQYRE+AAF++F S
Sbjct: 352 QIFLETNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRELAAFSQFAS 411

Query: 410 DLDASTQKMLARGERLTELLKQPQYAPLSVEEQVCVIYAGTRGYLDGIPTSSVRRFEAEF 469
           DLD +T+K L  G+++TELLKQ QYAP+SV +Q  V++A  RGYL  +  S +  FEA  
Sbjct: 412 DLDDATRKQLDHGQKVTELLKQKQYAPMSVAQQSLVLFAAERGYLADVELSKIGSFEAAL 471

Query: 470 LARLHSQHADLLEGIRTKKALDKDLENTLKSALDSFSST 508
           LA +   HA L++ I      + ++E  LK  LDSF +T
Sbjct: 472 LAYVDRDHAPLMQEINQTGGYNDEIEGKLKGILDSFKAT 510