Pairwise Alignments

Query, 319 a.a., AraC-family transcription regulator FtrA from Caulobacter crescentus NA1000

Subject, 316 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  166 bits (419), Expect = 9e-46
 Identities = 104/280 (37%), Positives = 144/280 (51%), Gaps = 2/280 (0%)

Query: 40  YRFATAAVEPGDLRGLGGVHVVGDGGLELLAGA-SIIVAPGWRGLDAPVPRPLIEALRAA 98
           YR  T   EPG LR   GV V  D  L+    A  +++ PG  G        L+  L+AA
Sbjct: 37  YRILTLGTEPGPLRASNGVAVQTDLLLDQAQDAYDLLLVPGGPGAYNECHPALLPWLKAA 96

Query: 99  HAGGARLMSICSGVFVLAATGLLDGRRATTHWRYADALRAHHPAIQVQPDVLYVDEGDVL 158
                R  SIC+G FVL   GLLD  R TTHW Y + L    P   V+ D +Y+ +G ++
Sbjct: 97  APRARRFGSICTGAFVLGHAGLLDNHRVTTHWHYTERLIKAFPKAIVETDRIYLQDGRLI 156

Query: 159 TSAGSAAGIDLGLHLIRRDFGPEAANTVARRLVVPPHRDGGQAQFVQRPVPVAHEASRLG 218
           TS G  AGIDL L ++ +D G + A  VA+ L+V   R GGQAQF      VA + + + 
Sbjct: 157 TSGGVTAGIDLALSVVAQDHGKQVAVDVAKVLLVVMKRQGGQAQFSPMTAAVAPQETAIT 216

Query: 219 PILDQMRANLADEHTIKTLAALAGMSERTFLRRFEAVTGATPARWLLAERLNHARDLLET 278
            + + +  +L +  TI+++AALAGMS R F R F      TP  +L   R++ AR LLET
Sbjct: 217 RVQNHVLEHLCEPFTIESMAALAGMSARHFARLFAKEVQMTPMAFLQGARIDRARQLLET 276

Query: 279 ASTSIDQVARAVGLGAPA-LRHHFRRQFSTTPGAYRARFA 317
               +  VA   G G+   +R  F  +    P  YR +F+
Sbjct: 277 TDLPLKTVAFHAGFGSVRHMRFLFSEKLGLNPTQYRQQFS 316