Pairwise Alignments

Query, 319 a.a., AraC-family transcription regulator FtrA from Caulobacter crescentus NA1000

Subject, 322 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  253 bits (646), Expect = 4e-72
 Identities = 136/310 (43%), Positives = 180/310 (58%), Gaps = 1/310 (0%)

Query: 8   VVALAYDGLCTFEYGVAVELFALPRPEMGEGWYRFATAAVEPGDLRGLGGVHVVGDGGLE 67
           V  LA++G+  F   V   +F   R   G   Y     A EPG +R   G+ +    GLE
Sbjct: 6   VAVLAFEGVSLFHLSVPSIVFGADRVPDGPPPYEVLYCAPEPGRVRTDQGMEIEVPAGLE 65

Query: 68  LLAGASIIVAPGWRGLDAPVPRPLIEALRAAHAGGARLMSICSGVFVLAATGLLDGRRAT 127
            +  A I++ P W   +   P  L +ALR AHA GA+++ +C G FVL   GLLDGRRAT
Sbjct: 66  AMTAADIVLVPAWNHPEQVAPVALTDALRQAHARGAQVVGLCLGAFVLGDAGLLDGRRAT 125

Query: 128 THWRYADALRAHHPAIQVQPDVLYVDEGDVLTSAGSAAGIDLGLHLIRRDFGPEAANTVA 187
           THW          P     PDVLYVD+G V+TSAG+ A ID  LHL+R+  G +AAN VA
Sbjct: 126 THWACRGLFARRFPEADFHPDVLYVDDGHVITSAGTVAAIDCCLHLVRQRHGADAANRVA 185

Query: 188 RRLVVPPHRDGGQAQFVQRPVPVAHEASRLGPILDQMRANLADEHTIKTLAALAGMSERT 247
           R LV PPHR GGQAQ++++PVP      RL  +++  R +L+   ++  LA +A MS RT
Sbjct: 186 RLLVTPPHRQGGQAQYIEQPVPSLPSEHRLPGVMEWAREHLSQPLSLDVLAEVARMSRRT 245

Query: 248 FLRRFEAVTGATPARWLLAERLNHARDLLETASTSIDQVARAVGLG-APALRHHFRRQFS 306
           F RRF   TG T  +WL+AER+  A+ LLET    I+++A  VG G A +LR HF  Q  
Sbjct: 246 FTRRFREATGTTVVKWLVAERVARAQQLLETTDMPIERLATEVGFGSALSLRQHFAGQMR 305

Query: 307 TTPGAYRARF 316
           T+P +YR  F
Sbjct: 306 TSPSSYRRAF 315