Pairwise Alignments

Query, 179 a.a., ECF-family RNA polymerase sigma factor from Caulobacter crescentus NA1000

Subject, 157 a.a., RNA polymerase sigma factor from Brevundimonas sp. GW460-12-10-14-LB2

 Score = 54.7 bits (130), Expect = 8e-13
 Identities = 49/150 (32%), Positives = 66/150 (44%), Gaps = 15/150 (10%)

Query: 33  RLRAYFMRRMSGAPGDVEDLVQETLLAVHLKRSTWDSAQSFTAWAHAVARYKLIDHWRR- 91
           RLR  F R +     D +DLVQ+T+      R  + +     +WA  + R   ID  R+ 
Sbjct: 4   RLRR-FARVLRPQDADAQDLVQQTVERALASRKGFRAGTRLDSWAFTIMRRIAIDDGRKA 62

Query: 92  -RKIRQTLPLEDHVDFLADDAPDPGVA--------LELDRALASLPQRQRMLVSDVKLTG 142
            R  R   P +D        APDP  A        LE   A+ +LP+ QR  V+ V + G
Sbjct: 63  QRWSRVVSPEDD----ATPRAPDPAQAGEGLRTDALEARDAIDALPEDQRQAVALVLIEG 118

Query: 143 LSLAEAGARAGISEGAAKVALHRALKALAE 172
           LS AEA    G+  G     L R  +AL E
Sbjct: 119 LSYAEAAQVLGVPAGTLTSRLVRGRQALVE 148