Pairwise Alignments

Query, 673 a.a., tetratricopeptide repeat family protein from Caulobacter crescentus NA1000

Subject, 583 a.a., TPR repeat from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 60.5 bits (145), Expect = 2e-13
 Identities = 67/260 (25%), Positives = 107/260 (41%), Gaps = 34/260 (13%)

Query: 85  LALCLERLGRTAEAARAFDRVSALEPRLSEAWRGLSESLELLGDRQGAERALARQLRAST 144
           L L   + G+   AA  F R     P+ ++A   L+ +L+ LG                 
Sbjct: 47  LGLLESQAGQLERAAGYFGRAVQSSPQNADALNNLAYTLQQLG----------------- 89

Query: 145 RDPLLVEAATALAEDRLGEAERLLRDRLKADAGDVAAIRMLAETGARLGRYADAEALLTR 204
           RD      A ALA     +A       L  D  D+A    L     +L +  +A A    
Sbjct: 90  RD------AEALAAYEQAQA-------LLPDDADIAI--NLGLLHKKLRQLPEALACFEH 134

Query: 205 CMELAPNFAAARHNLATMLYRQNKNLEALAQIEQLVAKDARHPGYANLYAAILARLGEYD 264
            ++  P   A   N   +L R  +  EAL+  E+ +  +  +P      +  L  L  YD
Sbjct: 135 ALQAHPAHVALLCNQGNVLQRLGRQQEALSSYERALTAEPDNPVVLCNLSNALNELARYD 194

Query: 265 RAIAVYGQVLADYPNQPKGWMSYGHALKTVGRQADSVAAYRKALDLAPTLGEVWWSLAN- 323
            A+A   +    +P   + W+  G+ALK +GR  ++VA+  KA+ L P + +   +LA  
Sbjct: 195 EALARAERASQAHPKHAQAWVERGNALKQLGRIPEAVASCEKAIALDPAMVQAHTNLAAT 254

Query: 324 -LKTVRFTPEDLAAMSQALE 342
            L     TP  +AA  ++LE
Sbjct: 255 VLSDSVDTPRVIAAGRKSLE 274



 Score = 26.2 bits (56), Expect = 0.005
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 15  ALEHAERLLEVDPVMAAEQARAILEVVPRHADTTRVLAAAQR 56
           A+   E+ + +DP M          V+    DT RV+AA ++
Sbjct: 230 AVASCEKAIALDPAMVQAHTNLAATVLSDSVDTPRVIAAGRK 271