Pairwise Alignments

Query, 358 a.a., periplasmic multidrug efflux lipoprotein precursor from Caulobacter crescentus NA1000

Subject, 366 a.a., efflux RND transporter periplasmic adaptor subunit from Pseudomonas fluorescens SBW25

 Score =  109 bits (272), Expect = 1e-28
 Identities = 102/359 (28%), Positives = 161/359 (44%), Gaps = 30/359 (8%)

Query: 10  LPPLAALLLAATLSACGGKTETDAPAPPTPVEAARVAAPDAAGAVTGAGALERRREMALS 69
           LP    LLLAA    CG +  T     P  V   +   P A    +  G +  R E  L+
Sbjct: 10  LPASLVLLLAA----CGHEEATQTTIRPAMVVQPQ---PSAQSMDSYPGEVRARYEPDLA 62

Query: 70  FRIPGVLTTMKIEAGDSVRAGQLIAAIDPAGVDARQQQT-------QADLERVRRDLERD 122
           FRI G ++   +E G+ V+A Q +A +DP  V  + + T       +A+L  VR + +R 
Sbjct: 63  FRIGGKVSKRLVEEGERVKANQALAELDPQDVRLQLEATRAQVAAAEANLSLVRAERDRY 122

Query: 123 KVLFEKGYVSRQRIDDR-------TSALKAAQAAYDAAHFDRRWANLVSPVSGVVLERRA 175
           K L ++  VSR + D+         + LK  +A +D A     +A L +P  GVV +R  
Sbjct: 123 KTLMDRQMVSRSQYDNSENLYRSGEARLKQIKAEFDVASNQAGYAVLRAPQDGVVAKRAV 182

Query: 176 QAGEVVGAGQVVARVADLTSPLVLRLPLAARDAARIRVGDPATVKVDEIGETALNGRVTR 235
           + G+VV AGQ V  +A      VL + L  +   R ++G P +V++    +   +GR+  
Sbjct: 183 EVGQVVSAGQTVFTLATDGEREVL-ISLPEQGFGRFKIGQPVSVELWSQPDQRFSGRIRE 241

Query: 236 VGEAADARTGAVLVEIELSAPPSTLRSGQVAHATLNVRAAPGVTTTYARVPAEAVLEANG 295
           +  AAD ++      +  +        GQ A   +    A G+      VP  A+   NG
Sbjct: 242 LSPAADPKSRTFAARVAFTGGKVPAELGQSARVFIQ---ADGIIP--LSVPLSALSAENG 296

Query: 296 QRAFVFRVD-GGKARRTAVGFGGF-DGDDALVSGLPNGAQVITAGAGFVSDGEAVAVVD 352
             ++V+RV      +R  V  G F +    ++ GL     VI AG   + +G+ V  VD
Sbjct: 297 -ASYVWRVQPDNTLKRVPVRIGAFGEKTVPVLEGLSPTDWVIAAGVHVLHEGQQVRPVD 354