Pairwise Alignments

Query, 358 a.a., periplasmic multidrug efflux lipoprotein precursor from Caulobacter crescentus NA1000

Subject, 409 a.a., MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit from Erwinia amylovora T8

 Score = 93.6 bits (231), Expect = 8e-24
 Identities = 91/339 (26%), Positives = 146/339 (43%), Gaps = 31/339 (9%)

Query: 38  TPVEAARVAAPDAAGAVTGAGALERRREMALSFRIPGVLTTMKIEAGDSVRAGQLIAAID 97
           TPV A  V   +    +T  G +     + ++ ++ G LT +  + G+ V AGQL+A ID
Sbjct: 63  TPVHAGEVRLANVPVYLTALGTVIPNATVTVTSQVSGTLTHVYFKEGEKVAAGQLLAQID 122

Query: 98  PAGVDA-------RQQQTQADLERVRRDLERDKVLFEKGYVSRQRIDDRTS-------AL 143
           P    A          Q QA L+  +  L R + L+ +  ++RQ ++ +T+       A+
Sbjct: 123 PRSYQATLAQYQGNLSQNQALLKSAQLTLARYQKLYARDLLARQDLETQTATVGQYLGAV 182

Query: 144 KAAQAAYDAAHFDRRWANLVSPVSGVVLERRAQAGEVVGAGQVVARVA-DLTSPLVLRLP 202
            A QA   AA  +  +A + +P+SG V  R   AG  + +      V    T P  +   
Sbjct: 183 TADQAQIAAAKLNIEFARITAPISGRVGLRLVDAGNRIQSSDTTGIVVITQTQPAAVTFS 242

Query: 203 LAARD----AARIRVGDP-ATVKVDEIGETAL-NGRVTRVGEAADARTGAVLVEIELSAP 256
           +   +       +  G P      D+ G T L  G V  +    D  TG+V ++      
Sbjct: 243 VPQSNIPTLLKALHNGQPLPATAFDQAGSTPLAQGEVQFISNQIDTSTGSVALKALFVNQ 302

Query: 257 PSTLRSGQVAHATLNVRAAPGVTTTYARVPAEAV-LEANGQRAFVFRVD---GGKARRTA 312
             TL + Q     +N+R   G       +PA A+ L ++G   +V   D     KA  T 
Sbjct: 303 DETLYANQF----VNLRLQTGTLKQATVIPARALQLSSDGSFVYVINKDRTVTRKAVTTG 358

Query: 313 VGFGGFDGDDALVSGLPNGAQVITAGAGFVSDGEAVAVV 351
             FG      A++SG+  G QV+T G   +SDG  V++V
Sbjct: 359 PAFG--SSQQAILSGVSPGEQVVTEGIDRLSDGSKVSLV 395