Pairwise Alignments

Query, 305 a.a., site-specific tyrosine recombinase XerD from Caulobacter crescentus NA1000

Subject, 305 a.a., site-specific tyrosine recombinase XerD from Rhodanobacter sp000427505 FW510-R12

 Score =  200 bits (508), Expect = 4e-56
 Identities = 127/291 (43%), Positives = 170/291 (58%), Gaps = 6/291 (2%)

Query: 11  FLEMMAVERAAARNTLTAYGKDLEDARGFLSRSGHDLHDADAETIEAYFQDLGARGLSPA 70
           F+E +  E   A  TL AY +DLE    +L+  G +L  A  E I AY    GA+  +  
Sbjct: 21  FVERVWSEDGLADRTLEAYRRDLEALALWLAARGRNLRTARREDISAYH---GAQPAAVR 77

Query: 71  TAARRRSAVRQFYRFVLGEGWRTDDPSRRVAAPKAGRPLPKVLERDEIERLLAAASAKDS 130
           + ARR+SA R++Y F+        DP+  +  PK  R LPK L   EIE LL A     +
Sbjct: 78  SIARRQSAFRRYYAFLARSEPGFADPTLLIERPKLPRSLPKALAEREIEGLLTAPDT-GT 136

Query: 131 AQGLRLACMIELIYASGLRISELLALPLLALARDPAYLIVKGKGGKERLAPLNDAARAAV 190
             GLR   M+EL+YASGLR+SEL+ LPL AL      L V GKGGK+RL P+ + A   +
Sbjct: 137 TLGLRDRAMLELMYASGLRVSELVELPLAALNPRQGVLRVTGKGGKDRLVPVGEEALVRI 196

Query: 191 KAYLVERPAFLPKGQKDSPWLFPSRGATGRLTPRRVGQLLEDAAIAAGIDRQKVSPHVLR 250
            AYL +    L KG++ +  LF SR   G +T +    L++  A+  GI+ +++SPHVLR
Sbjct: 197 GAYLTDARPALAKGRQPAA-LFLSRRGEG-MTRQMFWTLVKRYALKVGINPKRISPHVLR 254

Query: 251 HAFATHLLEGGADLRVIQTLLGHADIATTQIYTHVAGEHLAHIVQTKHPLG 301
           H+FATHLL  GADLR +Q LLGH+ ++TTQIYT VA E L  +    HP G
Sbjct: 255 HSFATHLLNHGADLRALQMLLGHSSLSTTQIYTLVAKEGLKRLHAQHHPRG 305