Pairwise Alignments

Query, 749 a.a., excinuclease ABC subunit B from Caulobacter crescentus NA1000

Subject, 897 a.a., UvrABC system protein B from Xanthobacter sp. DMC5

 Score = 1034 bits (2673), Expect = 0.0
 Identities = 518/696 (74%), Positives = 598/696 (85%), Gaps = 8/696 (1%)

Query: 30  WTPHRPSRPDKSEGGKKFKLVSDYQPAGDQPTAIAELVEGLQNGDQDQVLLGVTGSGKTF 89
           W PHRP RP+KSEGG  F + SD+QPAGDQP AI EL    + GD+DQVLLGVTGSGKTF
Sbjct: 83  WVPHRPPRPEKSEGGVAFTMKSDFQPAGDQPQAIKELCAQAEAGDRDQVLLGVTGSGKTF 142

Query: 90  TMAQVIARTQRPALILAPNKTLAAQLYSEMKSFFPENAVEYFVSYYDYYQPEAYVPRTDT 149
           TMA+VI + QRPA++LAPNKTLAAQLY E KSFFP+NAVEYFVSYYDYYQPEAYVPRTDT
Sbjct: 143 TMAKVIEKLQRPAIVLAPNKTLAAQLYGEFKSFFPDNAVEYFVSYYDYYQPEAYVPRTDT 202

Query: 150 YIEKDSSINEQIDRMRHSATRAILERDDVIVVASVSCIYGIGSVETYTAMTFTLEVGQRV 209
           YIEK+SSINEQIDRMRH+ATR++LERDDVI+VASVSCIYGIGSVETY+AMTF ++VG+R+
Sbjct: 203 YIEKESSINEQIDRMRHAATRSLLERDDVIIVASVSCIYGIGSVETYSAMTFDIKVGERI 262

Query: 210 DEKQLIADLVAQQYKRNDQAFERGTFRRRGDTIEIFPAHYEDRAWRVTMFGDEVEALSEF 269
           D++ LIADLVA QYKR    F RGTFR RGD++EIFPAHYEDRAWRV++FGDEVE+++EF
Sbjct: 263 DQRGLIADLVALQYKRIQSDFARGTFRVRGDSVEIFPAHYEDRAWRVSLFGDEVESIAEF 322

Query: 270 DTLTGKKTADLEMIKVYANSHHVTPRPTLRQAIIAIRQELKERLEWLTANGKLLEAQRLE 329
           D LTG+K+ D++ ++VYA SH+VTPRPTL QAI  I+ ELK RL+ L   G+LLEAQRLE
Sbjct: 323 DPLTGQKSGDMKSVRVYAASHYVTPRPTLIQAISGIKAELKMRLDELYKMGRLLEAQRLE 382

Query: 330 QRTTFDLEMIETTGSCAGIENYSRYLSGRKTGEPPPTFFEYIPDNALLFTDESHQTVPQI 389
           QRT +DLEM+E TGSCAGIENYSR+L+GRK GEPPPT FEY+PDNAL+F DESH TVPQI
Sbjct: 383 QRTRYDLEMMEATGSCAGIENYSRWLTGRKPGEPPPTLFEYVPDNALVFIDESHVTVPQI 442

Query: 390 GAMYKGDRNRKWTLAEYGFRLPSALDNRPLKFEEWDAMRPQSVHVSATPANWELERAGGV 449
           GAMY+GD  RK TLAEYGFRLPS +DNRPL+FEEW+AMRPQ+VHVSATP +WE+ + GGV
Sbjct: 443 GAMYRGDFRRKATLAEYGFRLPSCMDNRPLRFEEWEAMRPQTVHVSATPGSWEMNQTGGV 502

Query: 450 FAEQVIRPTGLIDPPVEVRPVSKDGASQVDDVVDEIRQTIQKGYRTLVTVLTKKMAEDLT 509
           F EQVIRPTGLIDPPVEVRP      +QVDD++ E+R    KGYRTLVTVLTK+MAEDLT
Sbjct: 503 FVEQVIRPTGLIDPPVEVRP----ARTQVDDLLGEVRAVAAKGYRTLVTVLTKRMAEDLT 558

Query: 510 EYLTEQGIRVRYMHSDVDTIERIEIIRDLRLGHFDVLVGINLLREGLDIPECGLVAILDA 569
           EYL E GIRVRYMHSD+DTIERIEIIRDLRLG FDVL+GINLLREGLDIPECGLVAILDA
Sbjct: 559 EYLHENGIRVRYMHSDIDTIERIEIIRDLRLGAFDVLIGINLLREGLDIPECGLVAILDA 618

Query: 570 DKEGFLRSETSLIQTIGRAARNVDGKVILYADRVTGSMERAMAETARRREKQHAYNLEHG 629
           DKEGFLRSETSL+QTIGRAARNVDG+V+LYAD +TGSMERAMAET+RRREKQ AYN EHG
Sbjct: 619 DKEGFLRSETSLVQTIGRAARNVDGRVVLYADHITGSMERAMAETSRRREKQVAYNTEHG 678

Query: 630 ITPESVKRDIKDILNSPYERGDRVLVPMGMSETDDRPFSGDNFKAALKDLEAKMREAAAN 689
           ITPESVK+ I DILNS YER D V V  G++E  +    G N KA + DLE +MR AAA+
Sbjct: 679 ITPESVKKAIGDILNSVYER-DHVQVDAGLAE--EGAAFGHNLKAVMADLEKRMRAAAAD 735

Query: 690 LEFETAARLRDEIKRMKLMDLEFANEVLTAPGEAVD 725
           L+FETAARLRDEI+R++  +L  +++ L A  EAVD
Sbjct: 736 LDFETAARLRDEIRRLEATELAVSDDPL-ARQEAVD 770