Pairwise Alignments

Query, 749 a.a., excinuclease ABC subunit B from Caulobacter crescentus NA1000

Subject, 671 a.a., excinuclease ABC subunit B from Pseudomonas simiae WCS417

 Score =  799 bits (2064), Expect = 0.0
 Identities = 403/667 (60%), Positives = 509/667 (76%), Gaps = 12/667 (1%)

Query: 47  FKLVSDYQPAGDQPTAIAELVEGLQNGDQDQVLLGVTGSGKTFTMAQVIARTQRPALILA 106
           F+LV+ ++PAGDQP AI ++VEG++ G   Q LLGVTGSGKTF++A VIA+  RP L+LA
Sbjct: 4   FQLVTRFEPAGDQPEAIRQMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQINRPTLVLA 63

Query: 107 PNKTLAAQLYSEMKSFFPENAVEYFVSYYDYYQPEAYVPRTDTYIEKDSSINEQIDRMRH 166
           PNKTLAAQLY E K+FFP NAVEYFVSYYDYYQPEAYVP +DT+IEKD+SIN+ I++MR 
Sbjct: 64  PNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQMRL 123

Query: 167 SATRAILERDDVIVVASVSCIYGIGSVETYTAMTFTLEVGQRVDEKQLIADLVAQQYKRN 226
           SAT+A+LER D I+V +VSCIYG+GS ETY  M   ++ G ++D+++L+  L + QY RN
Sbjct: 124 SATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRELLRRLTSLQYTRN 183

Query: 227 DQAFERGTFRRRGDTIEIFPAHYEDRAWRVTMFGDEVEALSEFDTLTGKKTADLEMIKVY 286
           D  F R TFR RGD I+I+PA  +  A R+ +F DEVE+LS FD LTG+    L     Y
Sbjct: 184 DMDFARATFRVRGDVIDIYPAESDLEAIRIELFDDEVESLSAFDPLTGEVIRKLPRFTFY 243

Query: 287 ANSHHVTPRPTLRQAIIAIRQELKERLEWLTANGKLLEAQRLEQRTTFDLEMIETTGSCA 346
             SH+VTPR TL  AI  I+ EL ERLE+L +N KL+EAQRLEQRT FDLEMI   G C 
Sbjct: 244 PKSHYVTPRETLMGAIEGIKVELAERLEYLRSNNKLVEAQRLEQRTRFDLEMILELGYCN 303

Query: 347 GIENYSRYLSGRKTGEPPPTFFEYIPDNALLFTDESHQTVPQIGAMYKGDRNRKWTLAEY 406
           GIENYSRYLSGR++G PPPT ++Y+P +ALL  DESH +VPQ+GAMYKGDR+RK TL EY
Sbjct: 304 GIENYSRYLSGRESGAPPPTLYDYLPPDALLVIDESHVSVPQVGAMYKGDRSRKETLVEY 363

Query: 407 GFRLPSALDNRPLKFEEWDAMRPQSVHVSATPANWELERAGGVFAEQVIRPTGLIDPPVE 466
           GFRLPSALDNRP++F+EW+A+ PQ++ VSATP N+E E AG V  EQ++RPTGL+DP +E
Sbjct: 364 GFRLPSALDNRPMRFDEWEAISPQTIFVSATPGNYEAEHAGRVI-EQLVRPTGLVDPEIE 422

Query: 467 VRPVSKDGASQVDDVVDEIRQTIQKGYRTLVTVLTKKMAEDLTEYLTEQGIRVRYMHSDV 526
           +RP      +QVDD++ EI + +    R LVT LTK+M+EDLT+YL + G+RVRY+HSD+
Sbjct: 423 IRP----ALTQVDDLLSEITKRVALEERVLVTTLTKRMSEDLTDYLADHGVRVRYLHSDI 478

Query: 527 DTIERIEIIRDLRLGHFDVLVGINLLREGLDIPECGLVAILDADKEGFLRSETSLIQTIG 586
           DT+ER+EIIRDLRLG FDVLVGINLLREGLD+PE  LVAILDADKEGFLRSE SLIQTIG
Sbjct: 479 DTVERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG 538

Query: 587 RAARNVDGKVILYADRVTGSMERAMAETARRREKQHAYNLEHGITPESVKRDIKDILNSP 646
           RAARN++G+ ILYADR+TGSMERA+ ET RRR+KQ A+NLE+GITP+ V +D+ DI+   
Sbjct: 539 RAARNLNGRAILYADRITGSMERAIGETQRRRDKQIAFNLENGITPKGVFKDVADIMEGA 598

Query: 647 YERGDRVLVPMGMSETDDRPFSGDN-------FKAALKDLEAKMREAAANLEFETAARLR 699
              G R     GM++  +     +N           ++ LE KM + A +LEFE AA+ R
Sbjct: 599 TVPGSRSKKRKGMAKAAEESAKYENELRSPSEITKRIRQLEEKMYQLARDLEFEAAAQTR 658

Query: 700 DEIKRMK 706
           DEI +++
Sbjct: 659 DEIGKLR 665