Pairwise Alignments

Query, 749 a.a., excinuclease ABC subunit B from Caulobacter crescentus NA1000

Subject, 702 a.a., excinuclease ABC subunit UvrB from Magnetospirillum magneticum AMB-1

 Score =  945 bits (2443), Expect = 0.0
 Identities = 467/674 (69%), Positives = 554/674 (82%), Gaps = 7/674 (1%)

Query: 37  RPDKSEGGKKFKLVSDYQPAGDQPTAIAELVEGLQNGDQDQVLLGVTGSGKTFTMAQVIA 96
           RP   EG  +FK+VSDYQPAGDQP AIAEL  G+   ++DQVLLGVTGSGKTFTMA VIA
Sbjct: 12  RPPLPEGDVEFKIVSDYQPAGDQPQAIAELSAGVDADERDQVLLGVTGSGKTFTMAHVIA 71

Query: 97  RTQRPALILAPNKTLAAQLYSEMKSFFPENAVEYFVSYYDYYQPEAYVPRTDTYIEKDSS 156
           RT+RPAL+LAPNKTLAAQLY+EMK FFP+NAVEYFVSYYDYYQPEAY+PRTDTYIEKDS+
Sbjct: 72  RTRRPALVLAPNKTLAAQLYAEMKGFFPDNAVEYFVSYYDYYQPEAYIPRTDTYIEKDSA 131

Query: 157 INEQIDRMRHSATRAILERDDVIVVASVSCIYGIGSVETYTAMTFTLEVGQRVDEKQLIA 216
           +NEQIDRMRH+ATRA+LER DVI+VASVSCIYGIGSVE+Y  MT  L+VG+ +D   L+ 
Sbjct: 132 VNEQIDRMRHAATRALLERRDVILVASVSCIYGIGSVESYARMTVALKVGESIDRSDLLK 191

Query: 217 DLVAQQYKRNDQAFERGTFRRRGDTIEIFPAHYEDRAWRVTMFGDEVEALSEFDTLTGKK 276
            LV  QY RND AFERGTFR RGD +EIFP HYEDRAWR+++FGDE+EA++EFD LTG+K
Sbjct: 192 RLVELQYTRNDAAFERGTFRVRGDAVEIFPVHYEDRAWRLSLFGDEIEAINEFDPLTGEK 251

Query: 277 TADLEMIKVYANSHHVTPRPTLRQAIIAIRQELKERLEWLTANGKLLEAQRLEQRTTFDL 336
           T  L  + VY +SH+VTPRPT+ QAI  I+ ELKE LE   A GKLLEAQRLEQRT FDL
Sbjct: 252 TCSLSEVTVYPSSHYVTPRPTITQAIKGIKAELKETLERFHAEGKLLEAQRLEQRTNFDL 311

Query: 337 EMIETTGSCAGIENYSRYLSGRKTGEPPPTFFEYIPDNALLFTDESHQTVPQIGAMYKGD 396
           EM+ETTG C  IENYSRYL+GR+ G+PPPT FEY+P++ALL  DESH TVPQIG MY+GD
Sbjct: 312 EMLETTGHCKSIENYSRYLTGRRPGDPPPTLFEYLPEDALLIVDESHVTVPQIGGMYRGD 371

Query: 397 RNRKWTLAEYGFRLPSALDNRPLKFEEWDAMRPQSVHVSATPANWELERAGGVFAEQVIR 456
            NRK  LAE+GFRLPS +DNRPLKFEEW+ MRPQ+V+VSATP  WE+ER GGVF EQVIR
Sbjct: 372 FNRKSVLAEFGFRLPSCIDNRPLKFEEWELMRPQTVYVSATPGPWEMERTGGVFTEQVIR 431

Query: 457 PTGLIDPPVEVRPVSKDGASQVDDVVDEIRQTIQKGYRTLVTVLTKKMAEDLTEYLTEQG 516
           PTGLIDP   VRPV      QVDD++ E+RQ  + G RTLVT LTK+MAEDLTEY+ + G
Sbjct: 432 PTGLIDPVCIVRPVE----HQVDDLLGEVRQMARLGNRTLVTTLTKRMAEDLTEYMHDNG 487

Query: 517 IRVRYMHSDVDTIERIEIIRDLRLGHFDVLVGINLLREGLDIPECGLVAILDADKEGFLR 576
           +RVRY+HSD+DT+ERIEIIRDLRLG FDVL+GINLLREGLDIPEC LVAILDADKEGFLR
Sbjct: 488 VRVRYLHSDIDTLERIEIIRDLRLGAFDVLIGINLLREGLDIPECALVAILDADKEGFLR 547

Query: 577 SETSLIQTIGRAARNVDGKVILYADRVTGSMERAMAETARRREKQHAYNLEHGITPESVK 636
           S+TSLIQTIGRAARN+DG+VILYAD++T S++ A+AET RRREKQ AYN  HGITPE ++
Sbjct: 548 SKTSLIQTIGRAARNIDGRVILYADKMTASLDYALAETNRRREKQQAYNALHGITPEGIR 607

Query: 637 RDIKDILNSPYERGDRVLVPMGMSETDDRPFSGDNFKAALKDLEAKMREAAANLEFETAA 696
           + + D+++S YE      V +G  ++      G N  +   D+E +M+ AAA+LEFE AA
Sbjct: 608 KAVSDVMDSVYEAD---YVTVGTGDSGLAHGVGHNLASVKADIEKRMKAAAADLEFEEAA 664

Query: 697 RLRDEIKRMKLMDL 710
           RLRDE++R++ +DL
Sbjct: 665 RLRDELRRLEALDL 678