Pairwise Alignments

Query, 749 a.a., excinuclease ABC subunit B from Caulobacter crescentus NA1000

Subject, 673 a.a., Excinuclease ABC subunit B from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  791 bits (2042), Expect = 0.0
 Identities = 407/671 (60%), Positives = 503/671 (74%), Gaps = 16/671 (2%)

Query: 45  KKFKLVSDYQPAGDQPTAIAELVEGLQNGDQDQVLLGVTGSGKTFTMAQVIARTQRPALI 104
           K FKL S ++P+GDQP AI  L EGL++G   Q LLGVTGSGKTFT+A VIA  QRP ++
Sbjct: 3   KPFKLNSAFKPSGDQPDAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMV 62

Query: 105 LAPNKTLAAQLYSEMKSFFPENAVEYFVSYYDYYQPEAYVPRTDTYIEKDSSINEQIDRM 164
           LAPNKTLAAQLY EMK FFPENAVEYFVSYYDYYQPEAYVP +DT+IEKD+S+NE I++M
Sbjct: 63  LAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQM 122

Query: 165 RHSATRAILERDDVIVVASVSCIYGIGSVETYTAMTFTLEVGQRVDEKQLIADLVAQQYK 224
           R SAT+A+LER DV+VVASVS IYG+G  + Y  M   L VG  +D++ ++  L   QY 
Sbjct: 123 RLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMLIDQRAILRRLAELQYT 182

Query: 225 RNDQAFERGTFRRRGDTIEIFPAHYEDRAWRVTMFGDEVEALSEFDTLTGKKTADLEMIK 284
           RNDQAF+RGTFR RG+ I+IFPA  +D A RV +F +EVE LS FD LTG+  + +    
Sbjct: 183 RNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQVESTVPRYT 242

Query: 285 VYANSHHVTPRPTLRQAIIAIRQELKERLEWLTANGKLLEAQRLEQRTTFDLEMIETTGS 344
           +Y  +H+VTPR  + QA+  I+ EL +R + L AN KLLE QRL QRT FDLEM+   G 
Sbjct: 243 IYPKTHYVTPRERILQAMEEIKDELADRRKVLLANNKLLEEQRLSQRTQFDLEMMNELGY 302

Query: 345 CAGIENYSRYLSGRKTGEPPPTFFEYIPDNALLFTDESHQTVPQIGAMYKGDRNRKWTLA 404
           C+GIENYSR+LSGR  GEPPPT F+Y+P + LL  DESH T+PQIG MY+GDR RK TL 
Sbjct: 303 CSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKETLV 362

Query: 405 EYGFRLPSALDNRPLKFEEWDAMRPQSVHVSATPANWELERAGGVFAEQVIRPTGLIDPP 464
           EYGFRLPSALDNRPLKFEE++A+ PQ+++VSATP N+ELE++G    +QV+RPTGL+DP 
Sbjct: 363 EYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGDEVVDQVVRPTGLLDPI 422

Query: 465 VEVRPVSKDGASQVDDVVDEIRQTIQKGYRTLVTVLTKKMAEDLTEYLTEQGIRVRYMHS 524
           +EVRPV    A+QVDD++ EIRQ      R LVT LTK+MAEDLTEYL E G RVRY+HS
Sbjct: 423 IEVRPV----ATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHS 478

Query: 525 DVDTIERIEIIRDLRLGHFDVLVGINLLREGLDIPECGLVAILDADKEGFLRSETSLIQT 584
           D+DT+ER+EIIRDLRLG FDVLVGINLLREGLD+PE  LVAILDADKEGFLRSE SLIQT
Sbjct: 479 DIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQT 538

Query: 585 IGRAARNVDGKVILYADRVTGSMERAMAETARRREKQHAYNLEHGITPESVKRDIKDIL- 643
           IGRAARNV+GK ILY D++T SM +A+ ET RRREKQ  YN EHGITP+ + + + DIL 
Sbjct: 539 IGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILA 598

Query: 644 --------NSPYERGDRVLVPMGMSETDDRPFSGDNFKAALKDLEAKMREAAANLEFETA 695
                    +  +   R     G+ E D  P +    +  + +LE +M + A NLEFE A
Sbjct: 599 LGQNIAKTKAKGKGKGRSTAKAGIVELDMTPKA---LQQKIHELEGQMMQHAQNLEFEEA 655

Query: 696 ARLRDEIKRMK 706
           A++RD++ +++
Sbjct: 656 AQIRDQLHQLR 666