Pairwise Alignments

Query, 749 a.a., excinuclease ABC subunit B from Caulobacter crescentus NA1000

Subject, 673 a.a., UvrABC system protein B from Escherichia fergusonii Becca

 Score =  787 bits (2033), Expect = 0.0
 Identities = 407/668 (60%), Positives = 500/668 (74%), Gaps = 10/668 (1%)

Query: 45  KKFKLVSDYQPAGDQPTAIAELVEGLQNGDQDQVLLGVTGSGKTFTMAQVIARTQRPALI 104
           K FKL S ++P+GDQP AI  L EGL++G   Q LLGVTGSGKTFT+A VIA  QRP ++
Sbjct: 3   KPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMV 62

Query: 105 LAPNKTLAAQLYSEMKSFFPENAVEYFVSYYDYYQPEAYVPRTDTYIEKDSSINEQIDRM 164
           LAPNKTLAAQLY EMK FFPENAVEYFVSYYDYYQPEAYVP +DT+IEKD+S+NE I++M
Sbjct: 63  LAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQM 122

Query: 165 RHSATRAILERDDVIVVASVSCIYGIGSVETYTAMTFTLEVGQRVDEKQLIADLVAQQYK 224
           R SAT+A+LER DV+VVASVS IYG+G  + Y  M   L VG  +D++ ++  L   QY 
Sbjct: 123 RLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQYA 182

Query: 225 RNDQAFERGTFRRRGDTIEIFPAHYEDRAWRVTMFGDEVEALSEFDTLTGKKTADLEMIK 284
           RNDQAF+RGTFR RG+ I+IFPA  +D A RV +F +EVE LS FD LTG+  + +    
Sbjct: 183 RNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPRFT 242

Query: 285 VYANSHHVTPRPTLRQAIIAIRQELKERLEWLTANGKLLEAQRLEQRTTFDLEMIETTGS 344
           +Y  +H+VTPR  + QA+  I++EL  R + L  N KLLE QRL QRT FDLEM+   G 
Sbjct: 243 IYPKTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNELGY 302

Query: 345 CAGIENYSRYLSGRKTGEPPPTFFEYIPDNALLFTDESHQTVPQIGAMYKGDRNRKWTLA 404
           C+GIENYSR+LSGR  GEPPPT F+Y+P + LL  DESH T+PQIG MY+GDR RK TL 
Sbjct: 303 CSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKETLV 362

Query: 405 EYGFRLPSALDNRPLKFEEWDAMRPQSVHVSATPANWELERAGGVFAEQVIRPTGLIDPP 464
           EYGFRLPSALDNRPLKFEE++A+ PQ+++VSATP N+ELE++GG   +QV+RPTGL+DP 
Sbjct: 363 EYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLDPI 422

Query: 465 VEVRPVSKDGASQVDDVVDEIRQTIQKGYRTLVTVLTKKMAEDLTEYLTEQGIRVRYMHS 524
           +EVRPV    A+QVD+++ EIRQ      R LVT LTK+MAEDLTEYL E G RVRY+HS
Sbjct: 423 IEVRPV----ATQVDELLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHS 478

Query: 525 DVDTIERIEIIRDLRLGHFDVLVGINLLREGLDIPECGLVAILDADKEGFLRSETSLIQT 584
           D+DT+ER+EIIRDLRLG FDVLVGINLLREGLD+PE  LVAILDADKEGFLRSE SLIQT
Sbjct: 479 DIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQT 538

Query: 585 IGRAARNVDGKVILYADRVTGSMERAMAETARRREKQHAYNLEHGITPESVKRDIKDILN 644
           IGRAARNV+GK ILY D++T SM +A+ ET RRREKQ  YN EHGITP+ + + + DIL 
Sbjct: 539 IGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILA 598

Query: 645 SPYERGDRVLVPMGMS----ETDDRP--FSGDNFKAALKDLEAKMREAAANLEFETAARL 698
                        G S    E D+ P   S    +  + +LE  M + A NLEFE AA++
Sbjct: 599 LGQNIAKTKAKGRGKSRPIVEPDNVPMDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQI 658

Query: 699 RDEIKRMK 706
           RD++ +++
Sbjct: 659 RDQLHQLR 666