Pairwise Alignments

Query, 749 a.a., excinuclease ABC subunit B from Caulobacter crescentus NA1000

Subject, 670 a.a., excinuclease ABC subunit B from Dickeya dadantii 3937

 Score =  794 bits (2050), Expect = 0.0
 Identities = 412/665 (61%), Positives = 498/665 (74%), Gaps = 7/665 (1%)

Query: 45  KKFKLVSDYQPAGDQPTAIAELVEGLQNGDQDQVLLGVTGSGKTFTMAQVIARTQRPALI 104
           K FKL SD++PAGDQP AI  L EGL++G   Q LLGVTGSGKTFT+A VIA   RP ++
Sbjct: 3   KAFKLHSDFKPAGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLNRPTMV 62

Query: 105 LAPNKTLAAQLYSEMKSFFPENAVEYFVSYYDYYQPEAYVPRTDTYIEKDSSINEQIDRM 164
           LAPNKTLAAQLY EMK+FFPENAVEYFVSYYDYYQPEAYVP +DT+IEKD+S+NE I++M
Sbjct: 63  LAPNKTLAAQLYGEMKAFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQM 122

Query: 165 RHSATRAILERDDVIVVASVSCIYGIGSVETYTAMTFTLEVGQRVDEKQLIADLVAQQYK 224
           R SAT+A+LER DV+VVASVS IYG+G  + Y  M   L  G  +D++ ++  L   QY 
Sbjct: 123 RLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTQGMLIDQRAILRRLAELQYA 182

Query: 225 RNDQAFERGTFRRRGDTIEIFPAHYEDRAWRVTMFGDEVEALSEFDTLTGKKTADLEMIK 284
           RNDQAF RGTFR RG+ I+IFPA  ED A RV +F +EVE LS FD LTG     +    
Sbjct: 183 RNDQAFSRGTFRVRGEIIDIFPAESEDIALRVELFDEEVERLSLFDPLTGHIVQTVPRYT 242

Query: 285 VYANSHHVTPRPTLRQAIIAIRQELKERLEWLTANGKLLEAQRLEQRTTFDLEMIETTGS 344
           +Y  +H+VTPR  + QA+  I+ EL ER + L A  KLLE QRL QRTTFDLEM+   G 
Sbjct: 243 IYPKTHYVTPRERILQAMEEIKVELAERRQVLLAGNKLLEEQRLAQRTTFDLEMMNELGY 302

Query: 345 CAGIENYSRYLSGRKTGEPPPTFFEYIPDNALLFTDESHQTVPQIGAMYKGDRNRKWTLA 404
           C+GIENYSR+LSGR  GEPPPT F+Y+P + LL  DESH T+PQ+G MY+GDR RK TL 
Sbjct: 303 CSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVIDESHVTIPQLGGMYRGDRARKETLV 362

Query: 405 EYGFRLPSALDNRPLKFEEWDAMRPQSVHVSATPANWELERAGGVFAEQVIRPTGLIDPP 464
           EYGFRLPSALDNRP+KFEE++A+ PQ+++VSATP N+ELE++GG   +QV+RPTGL+DP 
Sbjct: 363 EYGFRLPSALDNRPMKFEEFEALAPQAIYVSATPGNYELEKSGGEVIDQVVRPTGLLDPE 422

Query: 465 VEVRPVSKDGASQVDDVVDEIRQTIQKGYRTLVTVLTKKMAEDLTEYLTEQGIRVRYMHS 524
           +EVRPV+    +QVDD++ EIR+      R LVT LTK+MAEDLTEYL E G RVRY+HS
Sbjct: 423 LEVRPVT----TQVDDLLSEIRKRAVINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHS 478

Query: 525 DVDTIERIEIIRDLRLGHFDVLVGINLLREGLDIPECGLVAILDADKEGFLRSETSLIQT 584
           D+DT+ER+EIIRDLRLG FDVLVGINLLREGLD+PE  LVAILDADKEGFLRSE SLIQT
Sbjct: 479 DIDTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQT 538

Query: 585 IGRAARNVDGKVILYADRVTGSMERAMAETARRREKQHAYNLEHGITPESVKRDIKDIL- 643
           IGRAARN++GK ILYAD++T SMERAM ET RRREKQ AYN +HGI P+ + + I DIL 
Sbjct: 539 IGRAARNLNGKAILYADKITPSMERAMNETQRRREKQQAYNEQHGIVPQGLNKKIGDILQ 598

Query: 644 --NSPYERGDRVLVPMGMSETDDRPFSGDNFKAALKDLEAKMREAAANLEFETAARLRDE 701
              S   RG              +  S       +++LE++M   A NLEFE AARLRDE
Sbjct: 599 IGQSANGRGKGRGKKAAEPAAHYQQLSPKALDQKIRELESQMLAHAQNLEFEEAARLRDE 658

Query: 702 IKRMK 706
           I  ++
Sbjct: 659 IHALR 663