Pairwise Alignments

Query, 749 a.a., excinuclease ABC subunit B from Caulobacter crescentus NA1000

Subject, 988 a.a., excinuclease ABC subunit B from Agrobacterium fabrum C58

 Score = 1030 bits (2662), Expect = 0.0
 Identities = 515/686 (75%), Positives = 590/686 (86%), Gaps = 9/686 (1%)

Query: 29  LWTPHRPSRPDKSEGGKKFKLVSDYQPAGDQPTAIAELVEGLQNGDQDQVLLGVTGSGKT 88
           +WTPHRP+RP KSEGG   ++ S+YQPAGDQPTAIA+LVEG+ +G++ QVLLGVTGSGKT
Sbjct: 153 MWTPHRPARPPKSEGGVTIRMDSEYQPAGDQPTAIADLVEGINSGERSQVLLGVTGSGKT 212

Query: 89  FTMAQVIARTQRPALILAPNKTLAAQLYSEMKSFFPENAVEYFVSYYDYYQPEAYVPRTD 148
           FTMA+VI  TQRPA+ILAPNKTLAAQLYSE K+FFP+NAVEYFVSYYDYYQPEAYVPR+D
Sbjct: 213 FTMAKVIEATQRPAVILAPNKTLAAQLYSEFKNFFPDNAVEYFVSYYDYYQPEAYVPRSD 272

Query: 149 TYIEKDSSINEQIDRMRHSATRAILERDDVIVVASVSCIYGIGSVETYTAMTFTLEVGQR 208
           T+IEK+SSINEQIDRMRHSATR++LERDD I+VASVSCIYGIGSVETYTAMTF ++VG R
Sbjct: 273 TFIEKESSINEQIDRMRHSATRSLLERDDCIIVASVSCIYGIGSVETYTAMTFQMQVGDR 332

Query: 209 VDEKQLIADLVAQQYKRNDQAFERGTFRRRGDTIEIFPAHYEDRAWRVTMFGDEVEALSE 268
           +D++QL+ADLVAQQYKR D  F+RG+FR RGDTIEIFPAH ED AWR++MFGDE+++++E
Sbjct: 333 LDQRQLLADLVAQQYKRRDMDFQRGSFRVRGDTIEIFPAHLEDAAWRISMFGDEIDSITE 392

Query: 269 FDTLTGKKTADLEMIKVYANSHHVTPRPTLRQAIIAIRQELKERLEWLTANGKLLEAQRL 328
           FD LTG+KT DL+ +K+YANSH+VTPRPTL  AI +I++ELK RL  L   G+LLEAQRL
Sbjct: 393 FDPLTGQKTGDLQSVKIYANSHYVTPRPTLNGAIKSIKEELKVRLAELEKAGRLLEAQRL 452

Query: 329 EQRTTFDLEMIETTGSCAGIENYSRYLSGRKTGEPPPTFFEYIPDNALLFTDESHQTVPQ 388
           EQRT +D+EM+E TGSCAGIENYSRYL+GR  GEPPPT FEYIPDNALLF DESH +V Q
Sbjct: 453 EQRTRYDIEMLEATGSCAGIENYSRYLTGRNPGEPPPTLFEYIPDNALLFIDESHVSVSQ 512

Query: 389 IGAMYKGDRNRKWTLAEYGFRLPSALDNRPLKFEEWDAMRPQSVHVSATPANWELERAGG 448
           IG MY+GD  RK TLAEYGFRLPS +DNRPL+FEEWDAMRP +V VSATP +WE+E++GG
Sbjct: 513 IGGMYRGDFRRKATLAEYGFRLPSCMDNRPLRFEEWDAMRPLTVAVSATPGSWEMEQSGG 572

Query: 449 VFAEQVIRPTGLIDPPVEVRPVSKDGASQVDDVVDEIRQTIQKGYRTLVTVLTKKMAEDL 508
           VFAEQVIRPTGLIDPPVEVR       SQVDDV+ EIR+T  KGYRTL TVLTK+MAEDL
Sbjct: 573 VFAEQVIRPTGLIDPPVEVR----SARSQVDDVLGEIRETAAKGYRTLCTVLTKRMAEDL 628

Query: 509 TEYLTEQGIRVRYMHSDVDTIERIEIIRDLRLGHFDVLVGINLLREGLDIPECGLVAILD 568
           TEYL EQG+RVRYMHSD+DT+ERIEIIRDLRLG FDVLVGINLLREGLDIPECG VAILD
Sbjct: 629 TEYLHEQGVRVRYMHSDIDTLERIEIIRDLRLGAFDVLVGINLLREGLDIPECGFVAILD 688

Query: 569 ADKEGFLRSETSLIQTIGRAARNVDGKVILYADRVTGSMERAMAETARRREKQHAYNLEH 628
           ADKEGFLRSETSLIQTIGRAARNVDGKVILYAD +TGSM+RAM ET+RRREKQ AYN EH
Sbjct: 689 ADKEGFLRSETSLIQTIGRAARNVDGKVILYADNITGSMKRAMEETSRRREKQMAYNAEH 748

Query: 629 GITPESVKRDIKDILNSPYERGDRVLVPM----GMSETDDRPFSGDNFKAALKDLEAKMR 684
           GITPESVK  I DIL+S YER D V   +    G    D     G+N +A L  LE  MR
Sbjct: 749 GITPESVKAKISDILDSVYER-DHVRADISGVSGKGFADGGHLVGNNLQAHLNALEKSMR 807

Query: 685 EAAANLEFETAARLRDEIKRMKLMDL 710
           +AAA+L+FE AARLRDEIKR+K  +L
Sbjct: 808 DAAADLDFEKAARLRDEIKRLKAAEL 833