Pairwise Alignments

Query, 342 a.a., membrane permease from Caulobacter crescentus NA1000

Subject, 356 a.a., AI-2E family transporter from Serratia liquefaciens MT49

 Score = 72.4 bits (176), Expect = 2e-17
 Identities = 68/323 (21%), Positives = 147/323 (45%), Gaps = 20/323 (6%)

Query: 18  LLYVFSAVLWPFTLALVLAILITSLSDRVVRLLPKARPWMVFAITAVIVGGIIVASMAVV 77
           +LY    +L P  +A+VLA L+   + R+ R+   +R W   ++  ++  GI +  + VV
Sbjct: 31  ILYFLHGILTPLLVAIVLAYLLEWPTARLQRI-GCSRNWAA-SMVMILFAGIAMLLVFVV 88

Query: 78  IGG----GARIVERMPAMMARIDQLLALIH-----LPGGGVMSLAALAQKVELGPLADGL 128
                  G  ++  +P M+ +     A +      L   G++ + A   +  L  + + +
Sbjct: 89  APTAWQQGINLMTDLPGMLNQFYNFAATLPKRYPALVDAGIIDMMAENLRGRLSGMGESV 148

Query: 129 LTSVQNASAGLGLTLIFL-------FFLLLSKPMIEKRIDQIVASRGGQGLAMVLERSFS 181
           +     +  GL    I+L       FFLL  K  +   + +++    G    + +E +  
Sbjct: 149 VKFSLASLVGLLTLAIYLILVPMMMFFLLKDKEQMLNAVRRVLPRNRGLAGQVWIEMN-Q 207

Query: 182 GVERYMYVQSITGLMIAFGSWVVMRAVGLESALFWSLVIFLFAYLPVLGVLAGSVGPTLF 241
            +  Y+  + +  +++   +++V   + +  +L  ++++     +P +G +  ++   + 
Sbjct: 208 QITNYIRGKVLEMVIVGVATYLVFAVLDMRYSLLLAVLVGFSVLIPYIGAVLVTIPVVVV 267

Query: 242 ALLQFPTLTPAIAIFVGIQVVSSIVGNLVLPKMQADSQNIDPAASLIAVGMWTVLWGVPG 301
           A+ Q+        + V   VV  + GNL++P + +++ N+ P   +++V ++  LWG  G
Sbjct: 268 AMFQWGVGADFWTLIVAYLVVQGLDGNLLVPILFSEAVNLHPLVIILSVIIFGGLWGFWG 327

Query: 302 AFLAIPL-TLALMYALAQYDDLR 323
            F AIPL TL      A  D+LR
Sbjct: 328 VFFAIPLATLVKAVIHAWPDELR 350