Pairwise Alignments

Query, 340 a.a., transposase from Caulobacter crescentus NA1000

Subject, 340 a.a., IS110 family transposase ISPfl1 from Pseudomonas sp. RS175

 Score =  255 bits (652), Expect = 1e-72
 Identities = 136/331 (41%), Positives = 199/331 (60%), Gaps = 1/331 (0%)

Query: 4   TTIGLDLAKSVFQVHGVSSEGQVTVRRKLRRGELVSFFRDLPPCLIGMEACATAHYWARE 63
           T + +D+ K  F +HG  ++G   +R+K  R +L+     LP C + ME+C  AH+ AR+
Sbjct: 5   TLLDIDIGKHSFHLHGQDAKGHQVLRKKTSRSQLLGTLAQLPACTVVMESCGGAHWLARQ 64

Query: 64  LSALGHEVRLMPPSYVKAYLRRQKNDAADAEAICEAVTRPTMRFVPVKSAERQAILTLHR 123
           + ALGHEV+L+ P YVK +++  KND  DAEAICEA +RP MRF  +K+AE+Q +  LHR
Sbjct: 65  VEALGHEVKLIAPQYVKPFVKGNKNDFIDAEAICEAASRPAMRFCSIKTAEQQTLSALHR 124

Query: 124 TRELLVRQKTTLIRAIRGHCAEFGLVVPQGARRVFDLLNLMREASSSSLPETAMVTMEML 183
            R+ L+  +T     I G   EFG+ +P GA    + +  + +     +P      +  L
Sbjct: 125 VRDSLIGHRTVATNQIHGFLLEFGISLPIGA-TALNRVPALLDDPQHPVPLRLKSVVMRL 183

Query: 184 GAQMEALALQIRTLERRLLAWHRENQTSQRLATIPGVGIITSTALAASISDPRLFRSGRE 243
             Q++ +  +I+ +E  L    +E+    RL +IPG+G IT++A+ A + D   +RSGR+
Sbjct: 184 HRQIQQMNDEIKDIESDLKQQLKEDDAGNRLQSIPGIGPITASAVLADVGDASNYRSGRD 243

Query: 244 FAAFLGLVPRQNSSGGKDRLGRITKKGDGYLRKLLVVGATSVIRRARTGVTPSAGWVQSL 303
           FAA LGLVPRQ S+GGK  L  I+K+GD ++R+LLV  A SVI+           WV+ L
Sbjct: 244 FAASLGLVPRQYSTGGKTVLLGISKRGDKHIRQLLVQDARSVIQHIDKREDALGPWVREL 303

Query: 304 LERRPSRVVTVAMANKTARIAWAVMTRGESY 334
           L RR S VV  A+ANK ARI WAV+ +G  Y
Sbjct: 304 LTRRHSNVVACALANKLARIVWAVLAKGGQY 334