Pairwise Alignments

Query, 340 a.a., transposase from Caulobacter crescentus NA1000

Subject, 339 a.a., IS110-like element ISEch3 family transposase from Dickeya dadantii 3937

 Score =  306 bits (783), Expect = 6e-88
 Identities = 158/343 (46%), Positives = 220/343 (64%), Gaps = 7/343 (2%)

Query: 1   MMTTTIGLDLAKSVFQVHGVSSEGQVTVRRKLRRGELVSFFRDLPPCLIGMEACATAHYW 60
           M  +T+G+DLAK+VFQ+HGV + G+  +R++L R   + F   LPPCLIGMEACA+AH++
Sbjct: 1   MQVSTLGIDLAKNVFQLHGVDNSGKTVLRKRLTRNAFLPFLAQLPPCLIGMEACASAHHF 60

Query: 61  ARELSALGHEVRLMPPSYVKAYLRRQKNDAADAEAICEAVTRPTMRFVPVKSAERQAILT 120
           AR L   GH+VRLMPPSYVK Y++R K DA DAEAICEAV RP MRFV VKS  +QAIL 
Sbjct: 61  ARRLMQYGHQVRLMPPSYVKPYVKRDKTDARDAEAICEAVARPNMRFVAVKSETQQAILA 120

Query: 121 LHRTRELLVRQKTTLIRAIRGHCAEFGLVVPQGARRVFDLLNLMREASSSSLPETAMVTM 180
           LH  R+LL+R++     ++R   AEFG+V+  G   ++  L ++ E   ++L      + 
Sbjct: 121 LHTERDLLIRERVASTNSLRAMLAEFGVVMETGLSALYKTLPVILEDGENALTALTRRSA 180

Query: 181 EMLGAQMEALALQIRTLERRLLAWHRENQTSQRLATIPGVGIITSTALAASISDPRLFRS 240
                 +  L  QI  +ER L AW    +  +RL  +PGVG++T+T + A++ D   F S
Sbjct: 181 ARQLTHLRELEHQIAEVERELSAWFHSQEACRRLEKVPGVGMLTATYMVAAVGDGSQFTS 240

Query: 241 GREFAAFLGLVPRQNSSGGKDRLGRITKKGDGYLRKLLVVGA---TSVIRRARTGVTPSA 297
            ++FAA++GL P+++SSGGK  LG I+K+GD Y R LL+ GA    +VI R R   T   
Sbjct: 241 SKQFAAWVGLTPKEHSSGGKQWLGPISKRGDRYFRYLLIHGARALAAVIERHRDKQT--- 297

Query: 298 GWVQSLLERRPSRVVTVAMANKTARIAWAVMTRGESYRAMATV 340
            W  SLL+R+P  V  VA A +TARI W+++  G  YR +A V
Sbjct: 298 -WFYSLLKRKPFNVAVVAQAGRTARILWSMLRGGSEYREIAPV 339