Pairwise Alignments

Query, 324 a.a., D-alanine--D-alanine ligase from Caulobacter crescentus NA1000

Subject, 318 a.a., D-alanine--D-alanine ligase B from Pseudomonas putida KT2440

 Score =  176 bits (445), Expect = 9e-49
 Identities = 128/320 (40%), Positives = 168/320 (52%), Gaps = 28/320 (8%)

Query: 8   DAPLAGRHIAVLLGGPSSERKVSLVSGAACAEALERLGAKVSRIDPGPDVAQVLAATKPD 67
           D    GR +AVL GG S+ER+VSL SGAA  +AL   G  V  ID G D+   L + K D
Sbjct: 13  DVKAFGR-VAVLYGGKSAEREVSLKSGAAVIDALSTAGVDVVAIDVGDDLLARLQSEKID 71

Query: 68  MVFNALHGEWGEDGCVQGVLETLKLPYTHSGVLASALAMDKAKAKAVLAAAGVTVPGGGL 127
             F  LHG  GEDG +QG+LE L +PYT SG+LASALAMDK + K V  + G+  P    
Sbjct: 72  RAFIILHGRGGEDGSMQGLLECLGIPYTGSGILASALAMDKLRTKQVWQSLGIPTP---- 127

Query: 128 FNRHDV--ARDHVLQP------PYVVKPNAEGSSVGVFIIKEGANRPPEEVGA--PSWTF 177
             RH V  +    LQ       P +VKP  EGSS+G+  +    N   E V A   +  +
Sbjct: 128 --RHAVLASESDCLQASTELGFPLIVKPAHEGSSIGMAKV----NSTQELVAAWQDAAKY 181

Query: 178 GEEVMVEPYIQGMELAVAVL-GESNGPRALAVTDIRASTGFYDYEAKYSEGGSIHVLPAP 236
             +V+VE +I G E  +AVL G+   P AL    +     FYDY+AKY    + + +P  
Sbjct: 182 DSQVLVEQWIHGPEFTIAVLRGQVLPPIALGTPHV-----FYDYDAKYIVNDTQYRIPCG 236

Query: 237 IPNAVRDRAMRMAELAHTALGCRGVTRSDFRYDDINDLLVLLEVNTQPGMTPTSLAPEQA 296
           + +      + +   A  A+G  G  R D   D+      LLEVNT PGMT  SL P  A
Sbjct: 237 LDSVKEQELIDLTARACDAIGIEGWGRLDVMQDE-QGRFWLLEVNTAPGMTDHSLVPMAA 295

Query: 297 DHVGIPFDQLVLWIVEDAYA 316
              G+ F QLVL I+ ++ A
Sbjct: 296 RAAGLDFQQLVLAILAESVA 315