Pairwise Alignments

Query, 418 a.a., DNA polymerase IV-kappa DinB from Caulobacter crescentus NA1000

Subject, 357 a.a., DNA polymerase IV from Agrobacterium fabrum C58

 Score =  226 bits (575), Expect = 1e-63
 Identities = 139/357 (38%), Positives = 196/357 (54%), Gaps = 10/357 (2%)

Query: 38  IAHMDCDAFYASVEKRDDPSLRDLPVIIGGGK-RGVVTTACYIARMSGAKSAMPMFKALK 96
           I H+D DAFYASVE+RD+P LR  PV +G    RGVV  A Y AR  G +SAMP   A +
Sbjct: 4   IIHVDMDAFYASVEQRDNPELRGRPVAVGSAAARGVVAAASYEAREFGVRSAMPSVTAAR 63

Query: 97  LCPDAVVIKPNFAKYKEESRRIHEKLDRLTPLIQPLSLDEAWIDLTGTERLHGATPAQML 156
            CPD + + P F  YK  S++I       T LI+PLSLDEA++D+T  E L G   A  +
Sbjct: 64  RCPDLIFVPPRFDVYKAVSQQIRAIFAEYTRLIEPLSLDEAYLDVT--ENLKGMEIATEI 121

Query: 157 A-RLQAEIERDIGLTVSVGLAPNKFLAKIASELDKPRGFSAIGAAEAQSFLANKPVNILP 215
           A  ++  I++  GL  S G++ NKFLAK+AS+L+KP G + I      +F+    V    
Sbjct: 122 ASEIRERIKQITGLNASAGISYNKFLAKMASDLNKPNGQAVITPKNGPAFVEQLAVKKFH 181

Query: 216 GVGPATVASLAEIGLRTVGDIAAADLKLLANRLGSGGMRLHRLAHGQDSRIVDPDQARKT 275
           GVGPAT   +   G+ T  D+ +  L+ LA   G  G   + +A G D R V PD+ RK+
Sbjct: 182 GVGPATAEKMHRFGIETGADLKSKSLQFLAEHFGKSGAYFYGIARGIDERQVRPDRIRKS 241

Query: 276 ISAETTFNDDLHKREDLEDELWPLCEKVAKQARQEGVAGRVATLKLRTPDFKIHTRRRTL 335
           + AE TF+ D++  +    EL PL EKV      + V+G+  T+K++  DF   TR RT 
Sbjct: 242 VGAEDTFSVDINDLDLATAELRPLAEKVWHHCEAQRVSGKTVTVKVKYSDFTQATRSRTS 301

Query: 336 AVPTQTARTLFQVARELL-SAEPRGLAYRLIGAGLTEFVDADTAGADMFADEERRAL 391
           A+P    + + + A  LL +  P   + RL+G  L+   +   A      DEE+  L
Sbjct: 302 ALPVNGIQEILEAASALLATVYPFRRSVRLLGVTLSSLTNDQEA-----EDEEQPQL 353