Pairwise Alignments

Query, 322 a.a., type IV secretory pathway, VirB11 ATPase from Caulobacter crescentus NA1000

Subject, 423 a.a., CpaF family protein from Pseudomonas fluorescens SBW25

 Score =  171 bits (432), Expect = 4e-47
 Identities = 109/303 (35%), Positives = 164/303 (54%), Gaps = 22/303 (7%)

Query: 13  PLQPWLDRADVTDIWVNRPGEVWIETTKGVTSRLAAPDLTDQALQRLARQIAAASHQGVS 72
           PL+  L    VT+I VN P  V+IE   G+  +     + D  ++R+ ++I A   + + 
Sbjct: 90  PLEVLLRDPSVTEILVNGPHRVFIERD-GLLHQSDLRFIDDHHVERVMQRILAPLGRRLD 148

Query: 73  REQPLLSASLPNGARVQIIAPPATRGDLALAIRKHTLSDLSLSDLAIGGTLAPPALTGRA 132
              P++ A LP+G+RV  I PP       L+IRK     L  SDL    T+         
Sbjct: 149 ESSPMVDARLPDGSRVNAIIPPIALDGPCLSIRKFRKDMLKSSDLVAMQTIDQ------- 201

Query: 133 DADAQLRALLSAGDVEGFLRTAIQRRKTIVLSGGTSSGKTTLLNALVKEIPAHERLVLIE 192
                         +  F + A+ +R  I++SGGT +GKTTLLN L + I  HERLV IE
Sbjct: 202 -------------SIFEFFQEAVGKRCNILISGGTGTGKTTLLNILSQLINPHERLVTIE 248

Query: 193 DAPEIQLRHENAIGLIAARSDT-GEAQVDAEDLLQASLRMRPDRILLGELRGREAFAFLR 251
           D  E+QL H + + L     +  G  +V + DL++ +LRMRPDRI+LGE+RG E    + 
Sbjct: 249 DVAELQLGHPHVVRLETRPPNAEGHGEVRSSDLIRNALRMRPDRIILGEIRGVEVLDVMT 308

Query: 252 AVNTGHPGSITTVHADSPQGALDQIALLSLLAGVDLGWDTVRNYVRQVVDIVVQLNRVGG 311
           A+NTGH GS++TVHA++ Q AL ++  L  L G  +   T+R  +   +D+++QL R+  
Sbjct: 309 AMNTGHDGSMSTVHANNAQDALLRLETLVGLTGRVIAEKTLRQMICAALDVIIQLTRMPD 368

Query: 312 GRK 314
           GR+
Sbjct: 369 GRR 371