Pairwise Alignments

Query, 322 a.a., type IV secretory pathway, VirB11 ATPase from Caulobacter crescentus NA1000

Subject, 355 a.a., Conjugative transfer protein TrbB from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  138 bits (348), Expect = 2e-37
 Identities = 96/303 (31%), Positives = 160/303 (52%), Gaps = 33/303 (10%)

Query: 18  LDRADVTDIWVNRPGEVWIETTKGVTSRLAAPDLTDQALQRLARQIAAASHQGVSREQPL 77
           L+  DV +I +N    +WI+      + +   +L++   +R+ R +AA     V R QPL
Sbjct: 38  LEDPDVVEIMLNPDRTLWIDRLSSGRAPMGV-ELSEADGERIIRLVAAHVGAEVHRGQPL 96

Query: 78  LSASLPN-GARVQIIAPPATRGDLALAIRKHTLSDLSLSDLAIGGTLAPPALTGRADADA 136
           LSA LP  G R + I PPA  G    A+RK  +  + L    + G               
Sbjct: 97  LSAELPETGERFEGILPPAAPGP-TFALRKRAIGVIPLERYVVDG--------------- 140

Query: 137 QLRALLSAGDVEGFLRTAIQRRKTIVLSGGTSSGKTTLLNALVKEIPAH-ERLVLIEDAP 195
               +++A    G L  A++ R+ ++++G TSSGKTTL NAL+ EI A  +R++++ED  
Sbjct: 141 ----MMTAAQA-GLLVRAVRERQNVLIAGATSSGKTTLANALLAEIAATGDRVLVLEDTV 195

Query: 196 EIQLRHENAIGLIAARSDTGEAQVDAEDLLQASLRMRPDRILLGELRGREAFAFLRAVNT 255
           E+Q    + + L      T +  V   +L+++S+R+RPDR+++GE+RG EA   ++   T
Sbjct: 196 ELQCAARDHVPL-----RTRQGVVSMTELVRSSMRLRPDRVVVGEVRGAEALDLIKVWGT 250

Query: 256 GHPGSITTVHADSPQGALDQIALLSLLAGVDLGWDTVRNYVRQVVDIVVQLNRVGGGRKV 315
           GHPG I T+HA S  GAL ++  L L   V    +  R  + + V++V+ +   G  R++
Sbjct: 251 GHPGGIATIHAGSALGALLRLEQLILEVAV----NPPRALIAEAVNVVIHIAGRGRKRRI 306

Query: 316 TAV 318
            ++
Sbjct: 307 ESI 309